XXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCACTCTA
CATTCCCGGCTAGCTAGCCTGGAATTTGCAGCTGTCCTCCTGCCTCTGCC
TGCCTGAGTTCTGGTATTATAGGCATGGGCCCCATATATGGGCCACCATA
CCAGGCTTACTTTTGTTTGTCTACTTTAATTGAGATAGGGGTTCATGCAT
GCCAGGCTTACCTCAAACTTCCTATGTAGCCCAAGATGACTTTGAACTTT
TCATCCTCCAGCCTTAGCTTAGGAAGTACTGGCAACACAGTTACGCCAGA
ACTCAGTGGGCTTGCTGGGGCTGAGATTTGAATCCAGGTCCTTCTGTGTC
TAAGTCATTCATATGAACCATCTATTCCTCAGTTCTCTAAAGGAACACTT
TGTTAGGTATTATAAAGGGCCAGAATATTTCATACTGCAACCCCTCTTCT
TTCCCCCTGAGACAGGGCTTCTCTGTGTAGCCCGGGGTGCCCTGGAACTC
ACTCTATAGACCAGACTGACCTCAAACTCAGAAATCCACCTACCTCTTGT
CTCCCAAGTACTGGGATTGAAGACACACCCCCACTGCCATCCAGCCCATA
TTTTTATAAAATAATGTACATGAGTATTTTACCTATATGTATATAAGTGC
AGCACACATATGCATGCTGTCCATGGAGGCCATAAGAGAGCATCCCATCC
CCTGGAACTAGATTTGCAGGGCCTGGGAGCTGAATTCCGGTCTCCGAAAG
CCGGACAGTTGGTCCN

NNTTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCC
CATTTTTTAATAGGGTTATTTGGTTCTCTAGAGTCTAACTTCTTGAGTTC
TTTGTATATATTGGCTATTAGCCCTTTATTGGATGGAGGGTTGGTAAAGA
TCTTTTCCCAATATGTTGGTTGCTGTTTTGTCCTATTGATAGTGTCCTCT
GCCTTACAGAAGCTTTGCAATTTTATGAAGTTCCATTTGTCAATTCTTGA
TCTTAGAGCATAAGTTATTGGTATTTTGTCCAGGAACTTTTCCCCTGTGC
CCATGTGCTCAAAGCTTCTCACCACTTTCCTTTCTGTGGAGGTCCTTGAT
CCACTTGGACTTGAGCTTTGTACAATATGTGGAAATTTTTATCACTTTTC
TAATAATCATGACGTTTTAAAAATCATTTATAAGTAGAAAAAGTCTGAAC
AGCGTGGAAGGATCAGTATTGCTCAGGACCCTAGACCAAGATCTCAGCAC
TTAAGGAGACTTTTTTTGCTCCCTAGGGATATTAGGGTGGTAAGTATTAA
TAACACCTTGTGTTGTTGCGGCTATGGATTTTTGTTCTTACAATGCGCGT
CCAATTTTTTTTTTTTCTCTTTCTTTATACATTCTAGCCTTACTTTCTCC
TTAAAATGATTCTGCCACCTTTATTCTTCTCTTTTGGCCTACCCCCTCTC
TTCTTGTTTTCAGCGAGTTTTCTGTTCTTTTTACTCN

Query= MSMg01no363_l17.b1 MSMg01no363_l17.b1 CHROMAT_FILE:
MSMg01no363_l17.b1 PHD_FILE: MSMg01no363_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:32 2005
         (586 letters)



>mm_chr2_38797338_38798323
          Length = 986

 Score = 1087 bits (562), Expect = 0.0
 Identities = 574/578 (99%)
 Strand = Plus / Plus

                                                                       
Query: 9   ggaattcactctacattcccggctagctagcctggaatttgcagctgtcctcctgcctct 68
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattcactctacataccaggctagctagcctggaatttgcagctgtcctcctgcctct 268

                                                                       
Query: 69  gcctgcctgagttctggtattataggcatgggccccatatatgggccaccataccaggct 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gcctgcctgagttctggtattataggcatgggccccatatatgggccaccataccaggct 328

                                                                       
Query: 129 tacttttgtttgtctactttaattgagataggggttcatgcatgccaggcttacctcaaa 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tacttttgtttgtctactttaattgagataggggttcatgcatgccaggcttacctcaaa 388

                                                                       
Query: 189 cttcctatgtagcccaagatgactttgaacttttcatcctccagccttagcttaggaagt 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cttcctatgtagcccaagatgactttgaacttttcatcctccagccttagcttaggaagt 448

                                                                       
Query: 249 actggcaacacagttacgccagaactcagtgggcttgctggggctgagatttgaatccag 308
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 actggcaacacagtcacgccagaactcagtgggcttgctggggctgagatttgaatccag 508

                                                                       
Query: 309 gtccttctgtgtctaagtcattcatatgaaccatctattcctcagttctctaaaggaaca 368
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtccttctgtgtctaaatcattcatatgaaccatctattcctcagttctctaaaggaaca 568

                                                                       
Query: 369 ctttgttaggtattataaagggccagaatatttcatactgcaacccctcttctttccccc 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctttgttaggtattataaagggccagaatatttcatactgcaacccctcttctttccccc 628

                                                                       
Query: 429 tgagacagggcttctctgtgtagcccggggtgccctggaactcactctatagaccagact 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgagacagggcttctctgtgtagcccggggtgccctggaactcactctatagaccagact 688

                                                                       
Query: 489 gacctcaaactcagaaatccacctacctcttgtctcccaagtactgggattgaagacaca 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gacctcaaactcagaaatccacctacctcttgtctcccaagtactgggattgaagacaca 748

                                                 
Query: 549 cccccactgccatccagcccatatttttataaaataat 586
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 749 cccccactgccatccagcccatatttttataaaataat 786


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)