Query= MSMg01no363_o15.b1 MSMg01no363_o15.b1 CHROMAT_FILE:
MSMg01no363_o15.b1 PHD_FILE: MSMg01no363_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:47 2005
(539 letters)
>mm_chr2_91595773_91596711
Length = 939
Score = 1011 bits (523), Expect = 0.0
Identities = 532/535 (99%)
Strand = Plus / Plus
Query: 5 gaattcaggaaccttatcgctagaccatatgggacacatttcattaataggagaggccaa 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaacctaattgctagaccatatgggacacatttcattaataggagaggccaa 264
Query: 65 ttgtaaatatccacagctttcaagagagaaatagagaagaagaaagtcatttttttgagt 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttaaatatccacagctttcaagagagaaatagagaagaagaaagtcatttttttgagt 324
Query: 125 tagggtccaggaaagatgggcagtagaggtctttaagaagctgtaatgggggaaaggcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagggtccaggaaagatgggcagtagaggtctttaagaagctgtaatgggggaaaggcct 384
Query: 185 ttagagaaaggttgggcaagcctgctaacaatgttgtctgcaatcgtgcatttatgtaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttagagaaaggttgggcaagcctgctaacaatgttgtctgcaatcgtgcatttatgtaca 444
Query: 245 cacaccccatacacaaacaaccataaaaaacttttaaaaattagaactcagaagcctgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacaccccatacacaaacaaccataaaaaacttttaaaaattagaactcagaagcctgtt 504
Query: 305 ttgttttggattttttgaaatagggcctcactcttgtaggtctgattgtcctgaaactta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgttttggattttttgaaatagggcctcactcttgtaggtctgattgtcctgaaactta 564
Query: 365 cagagatctacctacctctgcccctcaaatgctgaataaaaggcatatgccactacatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagagatctacctacctctgcccctcaaatgctgaataaaaggcatatgccactacatct 624
Query: 425 tgctgttgtgggatattttgtttgttttgttttgaagcagagtctcattttatagcccat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgctgttgtgggatattttgtttgttttgttttgaagcagagtctcattttatagcccat 684
Query: 485 gctggcctggaacttgctgttatgtatagtccctctaaagttaatttgctttaca 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctggcctggaacttgctgttatgtatagtccctctaaagttaatttgctttaca 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_o15.g1 MSMg01no363_o15.g1 CHROMAT_FILE:
MSMg01no363_o15.g1 PHD_FILE: MSMg01no363_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:47 2005
(415 letters)
>mm_chr2_91733770_91734584
Length = 815
Score = 725 bits (375), Expect = 0.0
Identities = 404/419 (96%), Gaps = 12/419 (2%)
Strand = Plus / Minus
Query: 1 gaccttgacagaagcaaaattctgagatgacctgaatttaattcaaagagtggagggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 810 gaccttgacagaagcaaaattctgagatgacctgaatttaattcaaagagt----ggagg 755
Query: 61 ccgggcgtggtggcgaacgcctttaatccca----tttcttgggaggcagaagcaggcag 116
| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 754 ctgggcgtggtggcgaacgcctttaatcccagcac--tct--ggaggcagaagcaggcag 699
Query: 117 atttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggctata 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggctata 639
Query: 177 cagagaaaccctctctcgaaaaagagtggagggaggtggaaggaagtgatgagaaacatt 236
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 cagagaaaccttctctcgaaaaagagtggagggaggtggaaggaagtgatgagaaacatt 579
Query: 237 aattagacataatgaaagaccctctctcacactcctgaatgcatattgaaaccttgactc 296
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 578 aattagacataatgaaagaccctctctcacattcctgaatgcatattgaaaccttgactc 519
Query: 297 cattcttattacattcaacaccaaggctaacatcgttagctactgatttctccaattcag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cattcttattacattcaacaccaaggctaacatcgttagctactgatttctccaattcag 459
Query: 357 atgcaacagccactctccagtgtcacagaataattctgctcctcatatttaaaaatgta 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atgcaacagccactctccagtgtcacagaataattctgctcctcatatttaaaaatgta 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
