Query= MSMg01no364_e05.b1 MSMg01no364_e05.b1 CHROMAT_FILE:
MSMg01no364_e05.b1 PHD_FILE: MSMg01no364_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:18 2005
(467 letters)
>mm_chr2_53048765_53049631
Length = 867
Score = 870 bits (450), Expect = 0.0
Identities = 459/462 (99%)
Strand = Plus / Minus
Query: 6 ggaattcaatacatagtcaccaagtctgaccagtcatttaacagtttgttaagtcattgg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ggaattcaatacatagtcaccaagtctgaccagtcatttaacagtttgttaagtcattgg 608
Query: 66 agaggggttgcaatccactaatgggtttaacttttccattattttgtaaattttcaggct 125
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agaggggttgtaatccgctaatgggtttaacttttccattattttgtaaattttcaggcc 548
Query: 126 ccatctaataatcactgtagtgtaattaagattaacttcagtatatgctaatactgtaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccatctaataatcactgtagtgtaattaagattaacttcagtatatgctaatactgtaat 488
Query: 186 ttaatcacagtgatttaatattgtgccttaattgatgggttttagttgttgtttttgaaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttaatcacagtgatttaatattgtgccttaattgatgggttttagttgttgtttttgaaa 428
Query: 246 tgacattttaaagaagcatttaactgtctctcactctccctttttattatttttcagatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgacattttaaagaagcatttaactgtctctcactctccctttttattatttttcagatg 368
Query: 306 gggcatcctggcatgcattatgcaccaatgggcatgcaccctatgggtcagagagcaaac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gggcatcctggcatgcattatgcaccaatgggcatgcaccctatgggtcagagagcaaac 308
Query: 366 atgcctcctgtacctcatggaatgatgccacagatgatgccccctatgggagggcctcca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atgcctcctgtacctcatggaatgatgccacagatgatgccccctatgggagggcctcca 248
Query: 426 atgggacaagtaagaagacgctttccctttggcttgcttagt 467
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgggacaagtaagaagacgctttccctttggcttgcttagt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_e05.g1 MSMg01no364_e05.g1 CHROMAT_FILE:
MSMg01no364_e05.g1 PHD_FILE: MSMg01no364_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:19 2005
(475 letters)
>mm_chr2_52853674_52854548
Length = 875
Score = 851 bits (440), Expect = 0.0
Identities = 467/476 (98%), Gaps = 2/476 (0%)
Strand = Plus / Plus
Query: 1 agtagctgaggacaaggttgaggaaaactatcaaactcaggaagaacctgactgtaaaag 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 agtagctgaggacaaggttgaggaaaactatcaaactcaggaggaacctgactgtaaaag 260
Query: 61 aaggattataaaggatgagaagttagacgggggcaaaatgtgtagggaaacaaacaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggattataaaggatgagaagttagacgggggcaaaatgtgtagggaaacaaacaagcc 320
Query: 121 cctactggtgccccagtgttctctgggttcctgtgagttcctggtcctttttacctgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctactggtgccccagtgttctctgggttcctgtgagttcctggtcctttttacctgttt 380
Query: 181 ctatatttatatactggtctaagaagattaggcctgacatcaaaattcttttttatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatatttatatactggtctaagaagattaggcctgacatcaaaattcttttttatattt 440
Query: 241 tgagacagggtatctatatggccttgaatgacctagaactcactatatagcccaggctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagacagggtatctatatggccttgaatgacctagaactcactatatagcccaggctgg 500
Query: 301 ccatgaataaatcctcccgcctctgcctttccggttctggaattaaaggcaggcatcagc 360
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 ccatgaataaatcctcctgcctctgcctttccggttctggaattaaaggcaggcgtcagc 560
Query: 361 atgtgtgagagaagataggctt-cgtgcctgggaatctatacagcacacggtgagagcgt 419
||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtgtgagagaaaataggctttc-tgcctgggaatctatacagcacacggtgagagcgt 619
Query: 420 cgagccaccgggcagagttgtgaagctctcttttaaagatttatttttatttttaa 475
|||||||| |||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 620 cgagccacagggcagagttgtgaagttcccttttaaagatttatttttatttttaa 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
