Query= MSMg01no367_l14.b1 MSMg01no367_l14.b1 CHROMAT_FILE:
MSMg01no367_l14.b1 PHD_FILE: MSMg01no367_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:58 2005
(513 letters)
>mm_chr2_71720213_71721125
Length = 913
Score = 580 bits (300), Expect = e-170
Identities = 327/340 (96%), Gaps = 7/340 (2%)
Strand = Plus / Minus
Query: 8 ttccaggataacgagggctgcgcatgcagagaaaccctgtcttgaaaaccaaaaccaaaa 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttccaggataaccagggctgcgcatgcagagaaaccctgtcttgaaaaccaaaaccaaaa 601
Query: 68 ccaaaatcaaaacc-------aaaccaaaacaaaacacaaaactaaacacaaaaaccaaa 120
|||||| ||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 600 ccaaaaccaaaaccaaaatcaaaaccaaaccaaaacacaaaactaaacacaaaaaccaaa 541
Query: 121 gtggatgagaaaaaggaaactgttggattaaaagagattttcaagtcgcactgccttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtggatgagaaaaaggaaactgttggattaaaagagattttcaagtcgcactgccttctt 481
Query: 181 gctttcgtcaatttaaggaataagataaaagaaagaagtcttaattgtgatgcaactagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gctttcgtcaatttaaggaataagataaaagaaagaagtcttaattgtgatgcaactagt 421
Query: 241 catcagggatcacaattctgaatgagtgctttccgagacaccagcctgagtgtcattagc 300
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caccagggctcacacttctgaatgagtgctttccgagacaccagcctgagtgtcattagc 361
Query: 301 gccagtgattttcacacttttggaattcttagttgggaat 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gccagtgattttcacacttttggaattcttagttgggaat 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_l14.g1 MSMg01no367_l14.g1 CHROMAT_FILE:
MSMg01no367_l14.g1 PHD_FILE: MSMg01no367_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:58 2005
(529 letters)
>mm_chr2_71570164_71571092
Length = 929
Score = 992 bits (513), Expect = 0.0
Identities = 525/529 (99%)
Strand = Plus / Plus
Query: 1 aaatgcagctatggtcttcctttgaacagaaagaggaatggggtggggatgagggcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgcagctatggtcttcctttgaacagaaagaggaatggggtggggatgagggcaggg 260
Query: 61 cagagaggcataagagcttcatattaagtgaagacatgtgtggctgatacactcagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagaggcataagagcttcatattaagtgaagacatgtgtggctgatacactcagagag 320
Query: 121 tcagaaggaaccgtctccaattgtgccctctcccgccctatgccaccctcatccttgccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagaaggaaccgtctccaattgtgccctctcccgccctatgccaccctcatccttgccg 380
Query: 181 tggaagcagcagaattgtgtgcctcaagttcctaagtattatgccacgagagtcctgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaagcagcagaattgtgtgcctcaagttcctaagtattatgccacgagagtcctgtat 440
Query: 241 ggtgggcttggtttgagtgactcttgatgctgattttctcaaatgagtctgtgcaggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgggcttggtttgagtgactcttgatgctgattttctcaaatgagtctgtgcaggagt 500
Query: 301 gcaggcaggtgagccagatgctgtccttggccgagagctccaagcacctgcttgctccat 360
|||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gcagtcaagtgagccagatgctgtcctttgccgagagctccaagcacctgcttgctccat 560
Query: 361 ccacggaagtgctcgggcaaggacaccaagcttcactttctccgggagggtttcttagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccacggaagtgctcgggcaaggacaccaagcttcactttctccgggagggtttcttagct 620
Query: 421 ttgcggacaaccacagagaactgttgctagaccatttgttgactagccaggatatacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgcggacaaccacagagaactgttgctagaccatttgttgactagccaggatatacaga 680
Query: 481 ccccagaggtcaaacttattggagcattagctgtcattatttgatggca 529
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 ccccagaggtcaaacttattggagcactagctgtcattatttgatggca 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
