TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGA
ATTCATTTCTACTACTGTATGAGCCTATTTCCAGCCTCTGCATGTGTTAT
ACCAGGCTGAACAATCCAAGAATCCCCAGGTAGGCCATGTTCAAAGATCT
AGATTATTTGGCCTGGCATAAACATTTTTGAATTTTCTTTAAAGCATTTT
TCTCAACCAATCATCCTTCTGTGTGTCTTTGTTTTCTATATATAGATCCA
AGGCATGAATTTCTTTATTCTATATATACTTAAAAATATTTAAACAATTA
CCATTATATTATCCTCTAACCTTACAAACAAGTAAATCAAAATTAATGCA
TTACAGGGCAGTGGTAGCACACACCTTTGATCCCAGCACTTTGGGAGGCA
GAGGCAGGAGGATTTCTGAGTTTGAGGCCATCCAAGTCTACAGAGTGAGT
TCCAGGACAGCCAGGGCTACAATGAGAAACCCAGTCTGTAAGGAGCCGCC
CTTGCAATCATATCCGGTGTTCTAACTGATAAACAATTAGTCTGCATATG
TGCTGGGGTATTTCTCCATTCCTTGTGCCCTGCCTGTCCCGTGGCACGTC
ATCTGGGCTGATAGCAGCCAGTCAGGGTGAGTCACGTCTCCAACCGCTCT
TTGTGGGTTATAAAAGGACTGAAGTTCCTGTATTCGAGGCCTTCTTANAT
GTAAGCAAAAAGCTTTTGCGTAAAAAGGACTGGCTGTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTCCCAAATTTCATGATAATCCTGTACTGGG
ACACTGAGATTCCCTGCCCCAAGCTGATTGTAAATGGGTAACAAAAGTGC
CAGCAGCCAATGGCTAGGCAGGCAACAATGGCAGGACTTTTGGATTCATG
GCAAGGGAAACAAAGAGGATTTCCATGCCAGTAAAGGATTTGGATGCCAG
CTTCAGAGCTGGGAAAGACACAATACCAGCCACATAAAAGCTAGGAAAGA
GTGACCCCAGTGTTCCCTCCTCTGATTGGTTCTGGAGAAGCAAAGATGGG
CTCTAGATTTAGGAAATTAGGTGTATCACAGGGGAACCAGTAGCAATGTG
GATGTTTGGTAGTGTCCCAGCCAATGAGCTGATTTGGCATATTACATAAT
GCTGTTTGTCTTTCATTTCAGACTCCAAAGTACTTGTATGCTGAGCTAAG
AACTTAAACAGGTGGCATCTTATAGTAGAGCAGAGTAACCAACTGAGTCT
ACAGAAGGCATCACACCTACAGAATGGAATGCAATATAAAAAACTAATTG
GGGATTCTCAAATAAAAAACAAATGCTAAGATGTGAAATTAANGGATGAG
GAAAAATTGGGTTCTTAAAGGATTCGCTTGGTTTGCTGAGCCATTTGAGT
CCTCACTAGCTGTGCAGGGTCACAACTAAAAAAAAGTTGAGCTTAAN

Query= MSMg01no368_d11.b1 MSMg01no368_d11.b1 CHROMAT_FILE:
MSMg01no368_d11.b1 PHD_FILE: MSMg01no368_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:36 2005
         (620 letters)



>mm_chr2_177515673_177516693
          Length = 1021

 Score =  704 bits (364), Expect = 0.0
 Identities = 424/446 (95%), Gaps = 11/446 (2%)
 Strand = Plus / Plus

                                                                       
Query: 17  gaattcatttctac-tactgtat-gagcctatttccagcctctgcatgtgttataccagg 74
           |||||| ||||||| || ||||| || |||||||||| ||||||||| ||||||||||||
Sbjct: 216 gaattcctttctacatattgtatgga-cctatttccatcctctgcatttgttataccagg 274

                                                                       
Query: 75  ctgaacaatccaagaatccccaggtaggccatgttcaaagatctagattatttggcctgg 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctgaacaatccaagaatccccaggtaggccatgttcaaagatctagattatttggcctgg 334

                                                                       
Query: 135 cataaacatttttgaattttctttaaagcatttttctcaaccaatcatccttctgtgtgt 194
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 catagacatttttgaattttctttaaagcatttttctcaaccaatcatccttctgtgtgt 394

                                                                       
Query: 195 ctttgttttctatatat-agatccaaggcatgaatttctttattctatatatacttaaaa 253
           ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 395 ctttgttttctatatatgagatcaaaggcttgaatttctttattctatatatacttaaaa 454

                                                                       
Query: 254 atatttaaacaattaccattatattatcctctaaccttacaaacaagtaaatcaaaatta 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atatttaaacaattaccattatattatcctctaaccttacaaacaagtaaatcaaaatta 514

                                                                       
Query: 314 atgcatta-ca--gggcagtggtagcacacacctttgatcccagcactttgggaggcaga 370
           ||   ||| ||  |||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 515 at---ttatcaccgggcagtggtagcatacacctttgatcccagcactt-gggaggcaga 570

                                                                       
Query: 371 ggcaggaggatttctgagtttgaggccatccaagtctacagagtgagttccaggacagcc 430
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||
Sbjct: 571 ggcaggaggatttctgagtttgaggccatcctggtctacagagtgagttccaggacaccc 630

                                     
Query: 431 agggctacaatgagaaacccagtctg 456
           ||||||||||||||||||||||||||
Sbjct: 631 agggctacaatgagaaacccagtctg 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1021
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1011
Effective search space:   616710
Effective search space used:   616710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)