CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTGTTTATTTTAACCAACACTTTAAAAAAATGTGTTGCTCCTCC
CTAACAATGTAAAATCTCCCCATTTATTAAATCGTCTTGGCTGCGTTGAG
TACTATAGCATCCACATTCTCACATGTAAAATATTTCCTGATCATACTAA
ACGTTTCACATCTGCTCTGAATAAATGGCTGGAGTCCAAGAAATTGAAGC
ATTCTTAGAGGATCATTGTTGGTCTTCAGCCAACCCTGACACTGGAGAGG
ACTACAGGGAAAGGACCTCCTTTCCCATCCTCCTTTCTTTCCCAAGATTA
TTATTATTATTATTATTATTATTATTATTATTATTATTATCAGTACTTGA
TGACATCCCTCTTTCCTGATTACACACTCCTTTTTGTTAATATTTAGGAA
CTGGGCCAGGGTTCCAATTGTGTTTTTAGTTCTGTCTTTTCTTTCCACAT
CCATTGGAAAGCCAAGATCAGCCCTGTGTGACTTCCAACTGCTCCTTGGC
TACCCTAGACTCACTTTTTACCGCATGGAAATTCTTTGCACATTATAATC
AAACTTAACTCCAACACTTAATAAACACTCAAGGAGAGATTTGCCGAGAT
CCAGAANATATTAATTTATTGGTCTACTCATAGACTGGAAATATTTTCTG
GTAGAAACTCAACCACCAAACCTTTTTTTTGTTGAAATTTGGCTAAACAC
CCAAAA

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAG
CACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGCATGGATGTGGAGAAAGAGGAACACTT
CTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGT
CTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGTAA
TACCTCTCCTGGGAATTTATCCAGAAGATGCCCCAACTGGTAAGAAGGAC
ACATGCGCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTG
GAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAGTGGTA
CATCTACACAATGGAGTACTACTCAGCTATTANNAAGAATGAATTTATGA
AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCCCAAAGGAACTCCACCATATGTACTCCCTGATAAATGGAAAT
TAACCCCCAACCTAGGATTCCCAGGAATTAAGGAACATTTGTTAACACCT
GAAACCCCCAAAAATGAAAATGAAGGGGGGAACTAATCCCCCCCTAAAAA
TGGAAA

Query= MSMg01no368_m24.b1 MSMg01no368_m24.b1 CHROMAT_FILE:
MSMg01no368_m24.b1 PHD_FILE: MSMg01no368_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:22 2005
         (578 letters)



>mm_chr2_137400653_137401630
          Length = 978

 Score = 1087 bits (562), Expect = 0.0
 Identities = 573/578 (99%), Gaps = 3/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgtgtttattttaaccaacactttaaaaaaatgtgttgctcctccctaacaat 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattctgtgtttattttaaccaacactttaaaaaaatgtgttgctcctccctaacaat 260

                                                                       
Query: 64  gtaaaatctccccatttattaaatcgtcttggctgcgttgagtactatagcatccacatt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaaaatctccccatttattaaatcgtcttggctgcgttgagtactatagcatccacatt 320

                                                                       
Query: 124 ctcacatgtaaaatatttcctgatcatactaaacgtttcacatctgctctgaataaatgg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacatgtaaaatatttcctgatcatactaaacgtttcacatctgctctgaataaatgg 380

                                                                       
Query: 184 ctggagtccaagaaattgaagcattcttagaggatcattgttggtcttcagccaaccctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggagtccaagaaattgaagcattcttagaggatcattgttggtcttcagccaaccctg 440

                                                                       
Query: 244 acactggagaggactacagggaaaggacctcctttcccatcctcctttctttcccaagat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acactggagaggactacagggaaaggacctcctttcccatcctcctttctttcccaagat 500

                                                                       
Query: 304 ---tattattattattattattattattattattattattattatcagtacttgatgaca 360
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattattattattattattattattattattattattattattatcagtacttgatgaca 560

                                                                       
Query: 361 tccctctttcctgattacacactcctttttgttaatatttaggaactgggccagggttcc 420
            ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 cccctctttcctgattacacactcctttatgttaatatttaggaactgggccagggttcc 620

                                                                       
Query: 421 aattgtgtttttagttctgtcttttctttccacatccattggaaagccaagatcagccct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattgtgtttttagttctgtcttttctttccacatccattggaaagccaagatcagccct 680

                                                                       
Query: 481 gtgtgacttccaactgctccttggctaccctagactcactttttaccgcatggaaattct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtgacttccaactgctccttggctaccctagactcactttttaccgcatggaaattct 740

                                                 
Query: 541 ttgcacattataatcaaacttaactccaacacttaata 578
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgcacattataatcaaacttaactccaacacttaata 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)