Query= MSMg01no370_c11.b1 MSMg01no370_c11.b1 CHROMAT_FILE:
MSMg01no370_c11.b1 PHD_FILE: MSMg01no370_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:06 2005
(541 letters)
>mm_chr2_35814973_35815913
Length = 941
Score = 706 bits (365), Expect = 0.0
Identities = 398/409 (97%), Gaps = 2/409 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggcttataagagcggcttggaaaagtggtccctgctctggtatgcaggtaccc 64
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 409 gaattcaggcttataagaggggcttggaaaagtggtccctgccctggtatgcaggtaccc 350
Query: 65 aacagtccttactggtttgacaccagggaaactctgagtcttaagaccaggagagccctg 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 349 aacagtccttactggtttgacaccagggagactctgagtcttaagaccaggagagccctg 290
Query: 125 ggtaaactgaggcaaattagctggcagccctgcctggtgcacatggtagcgtgttcagga 184
||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 289 ggtaaactgaggcaaattatctggcagccctgcctggcgcacatggtagcgcgttcagga 230
Query: 185 aagagaggtaacagtaaagcaaccatcaggagacag-tcctgcaggct-ctctctccttt 242
|||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 229 aagagaggtaacagcaaagcaaccatcaggagacaggtcctgcaggcttctctctccttt 170
Query: 243 tatcaggtgggtcccggggcatggagcttgggttatcaggcttggtggctgttgtggtaa 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tatcaggcgggtcccggggcatggagcttgggttatcaggcttggtggctgttgtggtaa 110
Query: 303 acctccaatcccaataagcccatgcaaggaaaatgcaactcagttgtacatttataaact 362
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atctccaatcccaataagcccatgcaaggaaaatgcaactcagttgtacatttataaact 50
Query: 363 gcacacctatattgggcagatatgcctatataccacatttttccacagc 411
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gcacacctatattgggcagatatgcctatataccacatttttccacagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_c11.g1 MSMg01no370_c11.g1 CHROMAT_FILE:
MSMg01no370_c11.g1 PHD_FILE: MSMg01no370_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:06 2005
(102 letters)
>mm_chr2_35624034_35624535
Length = 502
Score = 195 bits (101), Expect = 5e-55
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 cgggcaggcagaaacatctgagcaggggggtagagatggggaccagcagtctataataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgggcaggcagaaacatctgagcaggggggtagagatggggaccagcagtctataataaa 260
Query: 61 ggtgcccatggcaggggaaaatggtggagggatgggggatg 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgcccatggcaggggaaaatggtggagggatgggggatg 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 102
Length of database: 502
Length adjustment: 8
Effective length of query: 94
Effective length of database: 494
Effective search space: 46436
Effective search space used: 46436
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
