Query= MSMg01no370_e07.b1 MSMg01no370_e07.b1 CHROMAT_FILE:
MSMg01no370_e07.b1 PHD_FILE: MSMg01no370_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:16 2005
(452 letters)
>mm_chr2_74618644_74619495
Length = 852
Score = 804 bits (416), Expect = 0.0
Identities = 432/444 (97%), Gaps = 11/444 (2%)
Strand = Plus / Minus
Query: 20 taaggaacccttcttagattgaattaactatagttctatctgtaatgatatcaggatcta 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 taaggaacccttcttagattgaattaactatagttctatctgtaatgatatcaggatcta 793
Query: 80 ttagaaatgtctagatacattgaataatcttgaatgtgtatatcttatctattcctagtg 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ttagaaatgtctagatacattgaataatcttgaatgtgtatatcttatctattcctagtg 733
Query: 140 attttttttaatttatagagaaatcactccattaaaatattttgtcactaaagaatcaca 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 attttttttaatttatagagaaatcactccattaaaatattttgtcactaaagaatcaca 673
Query: 200 aataagttt-----------ttttttttaaggtaaggacaaaaaaaaggaatgtgcatac 248
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aataagttttttgttttttgttttttttaaggtaaggacaaaaaaaaggaatgtgcatac 613
Query: 249 tagccaggaggtaagtaggaaatatacccaattaactcatgatcgaggccctcatccagt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tagccaggaggtaagtaggaaatatacccaattaactcatgatcgaggccctcatccagt 553
Query: 309 gacagctacctgctaagtaagcatacacagcctacagagtaagaaagatctgagaactgc 368
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 552 gacagctacctgctaagtaagcatacacagcctacagaggaagaaagatctgagaactgc 493
Query: 369 ttgataataggtatcaaaatcaaactaggagtgtgttggttacaaccatcccccaagagt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttgataataggtatcaaaatcaaactaggagtgtgttggttacaaccatcccccaagagt 433
Query: 429 tctaagctatagtttccatggcct 452
||||||||||||||||||||||||
Sbjct: 432 tctaagctatagtttccatggcct 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_e07.g1 MSMg01no370_e07.g1 CHROMAT_FILE:
MSMg01no370_e07.g1 PHD_FILE: MSMg01no370_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:16 2005
(403 letters)
>mm_chr2_74453813_74454615
Length = 803
Score = 758 bits (392), Expect = 0.0
Identities = 398/400 (99%)
Strand = Plus / Plus
Query: 1 actggtaaagtgcagggttgctatgataaagatgcaaaaacaacgcagtggcttgaaaat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 actggtaaagtgcagggttgctatgataaagatgcaaaaacaatgcagtggcttgaaaat 260
Query: 61 ggcctatttccctggcctcctattccaaggtgaacattctacatcaagatacactgctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcctatttccctggcctcctattccaaggtgaacattctacatcaagatacactgctcc 320
Query: 121 atcatccagggaccccactgtccctgtcatttgtatcagtgttctgaaggttcttgttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcatccagggaccccactgtccctgtcatttgtatcagtgttctgaaggttcttgttat 380
Query: 181 tatctctccacctgagcttcagccatcatggtggagagacacagtccctataggcttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatctctccacctgagcttcagccatcatggtggagagacacagtccctataggcttgct 440
Query: 241 aacttgcctttgcaatggcttttccctccttgtctgcttctgctttcaacagcaaacgtc 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 aacttgcctttgcaatggcttttccctccttgcctgcttctgctttcaacagcaaacgtc 500
Query: 301 agactgttttttaaagatgtccttggagcactgaattccattttgccaaccctggaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agactgttttttaaagatgtccttggagcactgaattccattttgccaaccctggaaggt 560
Query: 361 aacaggaatttactttcctccatttcacattgcctcgagg 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacaggaatttactttcctccatttcacattgcctcgagg 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
