CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAGATTGGCATCACTCCTGGAAGACT
GGCTGTCTCTGGGCAGGATTTGGGTACAGAGTTTTGTGGCACAAACTTAG
CTCTGAGGTGTAGATGAAGAACCTTATTGTGTGGTTTTAATCAGTATTTT
TATTCCTTTAGGAGTTATGTGACTCTTTTGGTAGTTTACCTTATTGTGAT
TCAACTTTATCCATGGTATCTGTCTAGAAAATCATCTATTTCATTTAGAT
TTTCCAGTTTTCTCAAATATGTTGTTATAAGAGCTTTTGAATGTTTGAAT
TTCCTGTTTCTCCTGTTATGTCTTCCTTTTCATTTTTGGTTTGGTTAAAA
ATGTATGAAAGATTTCAACTAAAATTTTGTTATGAATGGCACGAAGATTG
TTAATTTCGAAAAAAACAGGGCTACAAGGTATAGGGAAATAGGTATACAT
TTGAAGCAAATGCTTGATCACCATGTGTGTCTCAACGCATCAACTATTGA
AGTGACGATTTTAATGAAGATTTCCTTCCATCTCTAGGCAGTGTTGCAAT
CTGTTCTTTGGAGCAAAATCCGCCTGGCTTCGAAATATTTTAATCCTCTT
CCAACCTGGCTTTTAATTAAGCCGGTTGGTTTTAAAAAGCGCATTCCTCC
CCACTTCCTTATTATTTAAGGTCATTTTTTCGCCACACTCGTTTCTTCTT
GCTTTTTCCTTTTTTCTCTTCTTGTTTCTCN

TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATTGTGGGCCCACCAAGAAATTCTTCTACATTTTATGCATACTGG
GAAACAGTTGAAAACCTTTGTCCATGAGATGCTCTGGAGAATTCAGTTAA
CCACTGCTCTTGGGGCACAGTGGGGTTACAGTGAAGATGATTATGGGGCC
TAAACTATCAAATGTTTATTAAATTATGAATTTTTAAATTCATAATTATG
CCTGTTATCAGGTCTTATTTTTAGAAGTTATATAAAGATCCTATAAAGTA
AAAATATAGTGTATATTTATGTAGTTGTATATTTAGGATCTTCAGAAATA
TCAGGAACTGGCTCTCTAGGAGTCTTTACTCTTTCTGAATTTTATTGTAT
TCTGTATTTCTTTCTTCACAATGACTCCCTCATTTTATAAATGTACAAAT
TACCAGTAACAACCATGCCATGAGATAGCTGGTTTTTTATTCTGTCGTCT
TTTTTAAGTCATTGAAGCATAATAATTCTAAATGTATATTAATAGTTTAT
TTAATGCCCTTTGTTGAACTGTGAATCTTCAAGAAAGATCACGTGAAAGA
AGTATTTCTTTTGCCTTAAGAAATTATTCTGGAATGCTCCCAAATGATCC
TTTGAAAAAAAGCTTAAATTTAATGGGAATGCTTCCTACTGGTAGGGTGG
GGTTATTTTATTGTGACCTTTTATAATAGCGCAGCTTGTTGTTTTTTCCT
TCTTTCTCTTCCCTTTCTTTCTG

Query= MSMg01no371_f04.g1 MSMg01no371_f04.g1 CHROMAT_FILE:
MSMg01no371_f04.g1 PHD_FILE: MSMg01no371_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:43 2005
         (523 letters)



>mm_chr2_40493654_40494576
          Length = 923

 Score =  978 bits (506), Expect = 0.0
 Identities = 515/518 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   aattcaattgtgggcccaccaagaaattcttctacattttatgcatactgggaaacagtt 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aattcaattgtgggcccaccaagaaattcttctacattttatgcatactgggaaacagtt 864

                                                                       
Query: 66  gaaaacctttgtccatgagatgctctggagaattcagttaaccactgctcttggggcaca 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gaaaacctttgtccatgagatgctctggagaattcagttaaccactgctcttggggcaca 804

                                                                       
Query: 126 gtggggttacagtgaagatgattatggggcctaaactatcaaatgtttattaaattatga 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtggggttacagtgaagatgattatggggcctaaactatcaaatgtttattaaattatga 744

                                                                       
Query: 186 atttttaaattcataattatgcctgttatcaggtcttatttttagaagttatataaagat 245
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 743 atttttgaattcataattatgcctgttatcagggcttatttttagaagttatataaagat 684

                                                                       
Query: 246 cctataaagtaaaaatatagtgtatatttatgtagttgtatatttaggatcttcagaaat 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cctataaagtaaaaatatagtgtatatttatgtagttgtatatttaggatcttcagaaat 624

                                                                       
Query: 306 atcaggaactggctctctaggagtctttactctttctgaattttattgtattctgtattt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atcaggaactggctctctaggagtctttactctttctgaattttattgtattctgtattt 564

                                                                       
Query: 366 ctttcttcacaatgactccctcattttataaatgtacaaattaccagtaacaaccatgcc 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctttcttcacaatgactccctcattttataaatgtacaaattaccagtaacaaccatgcc 504

                                                                       
Query: 426 atgagatagctggttttttattctgtcgtcttttttaagtcattgaagcataataattct 485
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 503 atgagatagctggttttttattctgtcatcttttttaagtcattgaagcataataattct 444

                                                 
Query: 486 aaatgtatattaatagtttatttaatgccctttgttga 523
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaatgtatattaatagtttatttaatgccctttgttga 406


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)