Query= MSMg01no372_h08.b1 MSMg01no372_h08.b1 CHROMAT_FILE:
MSMg01no372_h08.b1 PHD_FILE: MSMg01no372_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:12 2005
(453 letters)
>mm_chr2_34324403_34325255
Length = 853
Score = 638 bits (330), Expect = 0.0
Identities = 348/356 (97%), Gaps = 4/356 (1%)
Strand = Plus / Minus
Query: 9 ggaattcctaatatctactggcacatagaggatgtaatggtatgtcagtcactgcataag 68
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggaattcctaatagcaagtggcacatagaggatgtaatggtatgtcagtcactgcataag 307
Query: 69 tgctttttaattatctatttatattctcaggataatcttataaaggtgttaccatgacat 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgctttttaattatctatttatattctcaggataatcttataaaggtgttaccatgacat 247
Query: 129 cccttttacaatttaacaacaacaaccaaaagaactctggctggcaagatggcttagtgg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cccttttacaatttaacaacaacaaccaaaagaactctggctggcaagatggcttagtgg 187
Query: 189 ctaagaacagttactatgggtctgacctaagtgtggtccccagaactcacatgatgggag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctaagaacagttactatgggtctgacctaagtgtggtccccagaactcacatgatgggag 127
Query: 249 gagagaaccagctccagcaggctagcctctgcctccacacggaggccatggctcatacat 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gagagaaccagctccagcaggctagcctctgcctccacacggaggccatggctcatacat 67
Query: 309 acacatcactctagcctctgcctccacacggaggccatggctcatacatacacatc 364
|||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 66 acacatcactctagcctctgcctccacacgcaggccatggc----acatacacatc 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_h08.g1 MSMg01no372_h08.g1 CHROMAT_FILE:
MSMg01no372_h08.g1 PHD_FILE: MSMg01no372_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:12 2005
(417 letters)
>mm_chr2_34194594_34195410
Length = 817
Score = 791 bits (409), Expect = 0.0
Identities = 415/417 (99%)
Strand = Plus / Plus
Query: 1 aaggaaatctctatggaaacactggctgagggtgcagtacagtggcagagcacctatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aaggaaatctctatggaaacactggctgagggtgcagtacagtggcagagcacctgtgca 260
Query: 61 agcatacactcacttacaaagctacaaaaagaggctgcacatggaaaatatgaaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcatacactcacttacaaagctacaaaaagaggctgcacatggaaaatatgaaaagaag 320
Query: 121 aaaaaggaaggagcctgcaagaacgtatgtgtgttcatcctaagagtgccaaatggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaggaaggagcctgcaagaacgtatgtgtgttcatcctaagagtgccaaatggaaag 380
Query: 181 aaaaacggaggaaggcagaaagaattcctgacatatggctgggaacttttaaattgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaacggaggaaggcagaaagaattcctgacatatggctgggaacttttaaattgtcta 440
Query: 241 aagatacccaaaagtttcattaagctccagagataaatgcaaaatctgcacacagagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagatacccaaaagtttcattaagctccagagataaatgcaaaatctgcacacagagaga 500
Query: 301 agcccacatcacacacagagggtcctgtgaggtgatgtatttaaaatactgaaagggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcccacatcacacacagagggtcctgtgaggtgatgtatttaaaatactgaaagggaaa 560
Query: 361 catgtacattaaaattaatttaaagggggaaagaagttgggctccatggcataaatc 417
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 catgtacattaaaattaatttaaagggggagagaagttgggctccatggcataaatc 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
