NAAAAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCCAGATC
CGCGGAATTCTCATCTGATGCTTCCCGAATGGCTGATAAGCACCTGAAAT
TATGTTCAACATCCTTAATCATCATGGAAATGCTTATCAAAGCAACCCTG
AGATCCCCCCTCACACCAGTCAGAATGGCTAATACCTTACACGCCTGTGA
CAGCACATGCTGGTCATTATGCGGAGAAAGATAACACTCCTCCATTGTTG
GTGAGATTGCAAGCTTGTACAACCACTCTGTATCTCACTCTGGAGGCCCC
TCCTAAACTGGTACATAATATTCACCCCATGATCCATATCTTCCTCTCCT
GTTCCCCATCTTTCTCCTCTGTTCCTTTCTGGGACACTGACTTTAGCTCC
ACTACCTTGATACACTTCTTTTTTCCCTTAGTACGAAGAGATAAAGATGC
CATAGATTTCTATTCTTCTACACGATAACAACCAATGTGGCCCTTTCCAA
TTGTGAAAAATGCTTGTCTTTTCTCCACTGGGTGAAAACTCCCTTTGTCA
AAAATCAAGGGGCCCTACGGTGGTGGGTTCCTTTCTTAGGCCTCCTTTCT
TTCCCATTTGCCTTCTTTTTGTTTTCCCTGTTCATAGGCCCTTGCTTTTT
TTTTCTCCATTTTCCCTCTACGAACCCATTTTTCCTTTCTTTTTTTTTTC
CCCCCCAACTCTTTTTTTCTCTTCTTAAAAATTTTTCTTTCCCTCCCTTA
TTTTTTTTTCTCCTCTTTTTTGTTCTTTTTCTTCTCTCCCTTTCTCTTTA
TTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAAAAAAGGGGGGGTAGTATGGCCCTGGAAAATGTGGTACTT
TCAATGATCCTGGAAATTTGGTTCAGAATCTGATTGGCCCTCTCACCATA
ATGAGGATCACCTAGGAGAACTCTAGGGAGAAGAGAGAGTCACAGAAGTT
GGCCTCAAATCTGGGAGCTTTACAAATTCCAGGGAATTTGGCCAGACTGA
GAAGTTGGGCTCACTCTATCAGAGCAAACCATTTCATGAATAGGGCTCCA
GACTGAGAAAAATGTCTGCCAGCCCATAAAAATGCTGCCCTTTCTACTCA
ACCATCCATCTGGATCACCCATCATTAGTTCAATGAAAAAGCACTAGCTC
CCACAGTACCCAAGCAGAGGCAACACTCAGTCCATCAACAAATCGATGAT
GACTAAGAACTTGTGTGAGGTTATGTATCCACTTTGGCATGACATCCACA
GTTCTTAACTTCTAGACTGTAATATCAATCTGCACAAGATTGCTTTCATT
TAACTTCAATTCATTTGGCAAAGGGGCTGCCCTGGTTTTCTTCAACCTCC
TATTATTGGACCCGAGGAAAGAAAAAAAGATTGGTGAAACTTAACTACCC
CGGCCCCAAGTATTCCGGGTTGAGGTTTCCCAACCGGTGGATTGGTGGGG
ACCCGGGGAAAACAAAAAGGGAAAAATGGGGTTTTGGTTTCCCCGTCTTT
CGTTGGAGG

Query= MSMg01no374_k21.g1 MSMg01no374_k21.g1 CHROMAT_FILE:
MSMg01no374_k21.g1 PHD_FILE: MSMg01no374_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:59 2005
         (437 letters)



>mm_chr2_57633028_57633864
          Length = 837

 Score =  814 bits (421), Expect = 0.0
 Identities = 434/439 (98%), Gaps = 2/439 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaaaa--gggggggtagtatggccctggaaaatgtggtactttcaatgatcctggaaat 58
           ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaaaaagggggggggtagtatggccctggaaaatgtggtactttcaatgatcctggaaat 586

                                                                       
Query: 59  ttggttcagaatctgattggccctctcaccataatgaggatcacctaggagaactctagg 118
           |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ttggctcagaatctgactggccctctcaccataatgaggatcacctaggagaactctagg 526

                                                                       
Query: 119 gagaagagagagtcacagaagttggcctcaaatctgggagctttacaaattccagggaat 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gagaagagagagtcacagaagttggcctcaaatctgggagctttacaaattccagggaat 466

                                                                       
Query: 179 ttggccagactgagaagttgggctcactctatcagagcaaaccatttcatgaatagggct 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttggccagactgagaagttgggctcactctatcagagcaaaccatttcatgaatagggct 406

                                                                       
Query: 239 ccagactgagaaaaatgtctgccagcccataaaaatgctgccctttctactcaaccatcc 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccagactgagaaaaatgtctgccagcccataaaaatgctgccctttctactcaaccatcc 346

                                                                       
Query: 299 atctggatcacccatcattagttcaatgaaaaagcactagctcccacagtacccaagcag 358
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atctggatcaaccatcattagttcaatgaaaaagcactagctcccacagtacccaagcag 286

                                                                       
Query: 359 aggcaacactcagtccatcaacaaatcgatgatgactaagaacttgtgtgaggttatgta 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aggcaacactcagtccatcaacaaatcgatgatgactaagaacttgtgtgaggttatgta 226

                              
Query: 419 tccactttggcatgacatc 437
           |||||||||||||||||||
Sbjct: 225 tccactttggcatgacatc 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)