Query= MSMg01no377_b12.b1 MSMg01no377_b12.b1 CHROMAT_FILE:
MSMg01no377_b12.b1 PHD_FILE: MSMg01no377_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:10 2005
(332 letters)
>mm_chr2_165311245_165311976
Length = 732
Score = 580 bits (300), Expect = e-170
Identities = 317/326 (97%), Gaps = 6/326 (1%)
Strand = Plus / Plus
Query: 1 tgactctgtacgctgtcaagaggaaagctgactcaactctgtcatctggaacatatcgaa 60
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgactctgtaggttgtcaagaggaaagctgactcaactctgtcatctggaacatatcgaa 260
Query: 61 agctgtctcctgccttcccagcatgcacttctagctttcctcttggcatcccttgctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgtctcctgccttcccagcatgcacttctagctttcctcttggcatcccttgctttt 320
Query: 121 cctcagaactcgttagaaatgcacattctctggcaacgagggaagcaggaactagcctcg 180
||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctca------gttagaaatgcagattctctggcaacgagggaagcaggaactagcctcg 374
Query: 181 ttactcagtctacagtgggctgccacagcctgtcttcagtctccataaacaataccactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttactcagtctacagtgggctgccacagcctgtcttcagtctccataaacaataccactt 434
Query: 241 gaatggcttcatgacagtgcttgctcactgtggtgtgcctagccttgtggccatgtccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaatggcttcatgacagtgcttgctcactgtggtgtgcctagccttgtggccatgtccca 494
Query: 301 cctgaatggtgacatctgtgtctgta 326
||||||||||||||||||||||||||
Sbjct: 495 cctgaatggtgacatctgtgtctgta 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_b12.g1 MSMg01no377_b12.g1 CHROMAT_FILE:
MSMg01no377_b12.g1 PHD_FILE: MSMg01no377_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:10 2005
(239 letters)
>mm_chr2_165499313_165499951
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 atcttgaagttgttggctttctcctttgtagcagtaggtacagcaagaggctgccagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atcttgaagttgttggctttctcctttgtagcagtaggtacagcaagaggctgccagatc 380
Query: 61 tcagcctggtgagaggtatgtgaaacctaggcttctgctctgcggtgtgaggcatggtgg 120
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcagcctggtgaggggtatgtaaaacctaggcttctgctctgcggtgtgaggcatggtgg 320
Query: 121 aagccccagccgtcattgtccttgttcctagggtggcatctggaacatccaggatgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aagccccagccgtcattgtccttgttcctagggtggcatctggaacatccaggatgtctg 260
Query: 181 agcatcccggttgctcaggatgcgcagagaagggacagaagaaagtagatctggtctct 239
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 259 agcatcccggttgctcaggatgcacagagaagggacagaagaaagtagatctggtctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
