Query= MSMg01no378_b10.b1 MSMg01no378_b10.b1 CHROMAT_FILE:
MSMg01no378_b10.b1 PHD_FILE: MSMg01no378_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:29 2005
(500 letters)
>mm_chr2_31588899_31589798
Length = 900
Score = 582 bits (301), Expect = e-170
Identities = 304/305 (99%)
Strand = Plus / Plus
Query: 5 gaattcacctcacccttcactgctcttggtccctcatgttccttcagcacaatatttatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctcacccttcactgctcttggtccctcatgttccttcagcacaatatttatg 264
Query: 65 agaaggatgggagctcggagcaggctggcctggggagtgtttctcacatggtgtctgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaaggatgggagctcggagcaggctggcctggggagtgtttctcacatggtgtctgtga 324
Query: 125 gcatcctacccatttacagccctaggaaggagtcattccctggcagacgcagtgggttct 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcgtcctacccatttacagccctaggaaggagtcattccctggcagacgcagtgggttct 384
Query: 185 actcagatgctctggcctccaacagccgctttcacttactgccattgtttaaacaagtgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actcagatgctctggcctccaacagccgctttcacttactgccattgtttaaacaagtgc 444
Query: 245 tgttcctggaagtggtttcagaatagtctgtccttgtagctcgctgctcctttgctcttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgttcctggaagtggtttcagaatagtctgtccttgtagctcgctgctcctttgctcttg 504
Query: 305 ttttt 309
|||||
Sbjct: 505 ttttt 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_b10.g1 MSMg01no378_b10.g1 CHROMAT_FILE:
MSMg01no378_b10.g1 PHD_FILE: MSMg01no378_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:29 2005
(313 letters)
>mm_chr2_31759210_31759923
Length = 714
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 1 tgtgcctggctccaggcaccacacagtgaagccggaagcagaggaggaccgtgaagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgtgcctggctccaggcaccacacagtgaagccggaagcagaggaggaccgtgaagggag 455
Query: 61 atgggctggaccagggcaagtgggatgctggggtggctggtacagacactgggaaggctt 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 454 atgggctggaccagggcaagtgggatgctggagtggctggtacagacactgggaaggctt 395
Query: 121 cttttccctctccaccatccttgcagaaggttccagggccccttccttcctttaccagca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 394 cttttccctctccaccatccttgcagaaggttccagggccccttccttccttcaccagca 335
Query: 181 tgtctttgaggttaaacagacagagccacaccacacacagctgaaacatcaaagggctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtctttgaggttaaacagacagagccacaccacacacagctgaaacatcaaagggctgc 275
Query: 241 tggggactgc-gggggactgtgggaaagactggggtgggcggatctgaatcctatgggtg 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tggggactgcggggggactgtgggaaagactggggtgggcggatctgaatcctatgggtg 215
Query: 300 ggggtggaagactg 313
||||||||||||||
Sbjct: 214 ggggtggaagactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
