Query= MSMg01no382_l04.b1 MSMg01no382_l04.b1 CHROMAT_FILE:
MSMg01no382_l04.b1 PHD_FILE: MSMg01no382_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:31 2005
(471 letters)
>mm_chr2_117056107_117056978
Length = 872
Score = 853 bits (441), Expect = 0.0
Identities = 459/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 8 gaattcccagttcagtggaagataggctctcataaaataagggccaaaaagatagaggaa 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcccagttcagtggaagataggctctcataaaataagggccaaaaagatagaggaa 267
Query: 68 gactcttaacattgacctctaagcccgcctgcacatatacacatacacaacaatagtgtg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gactcttaacattgacctctaagcccgcctgcacatatacacatacacaacaatagtgtg 327
Query: 128 attacatcttgggaatacatctacttttctagtgtgaacagagctggagagtttattgcg 187
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attacatcttggggatacatctacttttctagtgtgaacagagctggagagtttattgcg 387
Query: 188 tgcgagttcac-tcttgtgttgagttttctgtgtgttgggcctattcccagtcgcaggtt 246
||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 388 tgcgagttcacttcttgggttgagttttctgtgtgttgggcccattcccagtcgcaggtt 447
Query: 247 ctaagctaagcacctgttaaacccacagaaaagccagtcttgttttttggaccgatagac 306
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 448 ctaagctaagcacctgttaaacccacagaaaagccagtcttgttttttggactgatagac 507
Query: 307 aggcagctgatctatctctgtctttcctcagcccttgactgtcctgaggcagagtgaggt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aggcagctgatctatctctgtctttcctcagcccttgactgtcctgaggcagagtgaggt 567
Query: 367 tgtggctctgccttctgtcacgtgtctcattgccctgccttggcatttttgtccccagtg 426
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgtggctctgccttctgtcacgcgtctcattgccctgccttggcatttttgtccccagtg 627
Query: 427 aatgtattgcgtgcttcatttatctcttttgtgaccacgacagaa 471
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aatgtattgcgtgcttcatttatctcttttgtgaccacgacagaa 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space: 397382
Effective search space used: 397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_l04.g1 MSMg01no382_l04.g1 CHROMAT_FILE:
MSMg01no382_l04.g1 PHD_FILE: MSMg01no382_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:31 2005
(263 letters)
>mm_chr2_117220050_117220712
Length = 663
Score = 439 bits (227), Expect = e-128
Identities = 248/255 (97%), Gaps = 4/255 (1%)
Strand = Plus / Minus
Query: 1 tttctctctctgctccctggcttgtgatataagtggttttgtactgcacattctcccgtt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 416 tttctctttctgctccctggcttgtgatataagtggttttgtactgcacattctcccatt 357
Query: 61 gtgagatgttgccttgccacaggcccagtgcaatgggggcactgccaacgatctggagtc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 356 gtgagatgttgccttgccacaggcccagtgcaacgggggcactgccaacgatctggagtc 297
Query: 121 agatggggaaacaaagcagacctcctctactcataagttattaattctggactttgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agatggggaaacaaagcagacctcctctactcataagttattaattctggactttgttgc 237
Query: 181 agagtcagaaaatggactgaagtgctggcttagggaatatatatatattatatatatata 240
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 236 agagtcagaaaatggactgaagtgctggcttagggaata-a-atatattatatatatata 179
Query: 241 tatgtatatatatat 255
| | |||||||||||
Sbjct: 178 t-t-tatatatatat 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
