Query= MSMg01no386_l16.b1 MSMg01no386_l16.b1 CHROMAT_FILE:
MSMg01no386_l16.b1 PHD_FILE: MSMg01no386_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:36 2005
(373 letters)
>mm_chr2_148116052_148116824
Length = 773
Score = 650 bits (336), Expect = 0.0
Identities = 365/382 (95%), Gaps = 12/382 (3%)
Strand = Plus / Plus
Query: 4 ggaattccctatcctgcccaagaaaacaagaaagaaatctctccgtatactttccacttt 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggaattccctatccagccaaagaaaacaagaaagaaatctctccgtatactttccacttt 251
Query: 64 aatgacagttatatcactgcagtgaaggagctacgagggaaagtgaaaccagcttagcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aatgacagttatatcactgcagtgaaggagctacgagggaaagtgaaaccagcttagcct 311
Query: 124 ggagcatcaggatgctgaagtctgtagagactaagtgcatttc------------ttttt 171
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 312 ggagcatcaggatgctgaagtctgtagagactaagtgcatttctttcttttttttttttt 371
Query: 172 ttttttttttaggttgcatttcttaagtgaaggaagagtatactgtaaagtatgtatgaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttttttttttaggttgcatttcttaagtgaaggaagagtatactgtaaagtatgtatgaa 431
Query: 232 taataaggactaccaaacaaaccagaaatgcagaagaaatcctttatattactagaaagc 291
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 432 taataaggactaccaaacaaaccagaaatgcagaagaaatcctttaaattactagaaagc 491
Query: 292 taatgatgtgtgtacattcatatacaaggatacacaggcatacacatgtgcatatacaca 351
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tactgatgtgtgtacatccatatacaaggatacacaggcatacacatgtgcatatacaca 551
Query: 352 tacaatgtatgtagatcaaaga 373
||||||||||||||||||||||
Sbjct: 552 tacaatgtatgtagatcaaaga 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_l16.g1 MSMg01no386_l16.g1 CHROMAT_FILE:
MSMg01no386_l16.g1 PHD_FILE: MSMg01no386_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:36 2005
(410 letters)
>mm_chr2_148256505_148257314
Length = 810
Score = 762 bits (394), Expect = 0.0
Identities = 406/410 (99%)
Strand = Plus / Minus
Query: 1 ttctagatagctcctgacaagtatcaggaaaatcatataaattttacaacttattaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttctagatagctcctgacaagtatcaggaaaatcatataaattttacaacttattaaata 551
Query: 61 tgaaagtagcgtgtatttgttgaacaacaactagtgtttctgctcccccaaccgtggtag 120
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 550 tgaaagtagcgtgtatttgttgaacaataagtagtgtttctgctcccccaaccgtggtag 491
Query: 121 ggacattggagcagagaattctaaaatctgttcacagatgacagatggtgatattgggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggacattggagcagagaattctaaaatctgttcacagatgacagatggtgatattgggta 431
Query: 181 tgaatcactaggtttcactaactctggctaaacattaacaggaacaacatctggaagctg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 430 tgaatcactaggtttcactaactccggctaaacattaacaggaacaacatctggaagctg 371
Query: 241 taatatgaaaaaaaaatgcatcaacaagtcatgaataagctggcattttagcctttagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 taatatgaaaaaaaaatgcatcaacaagtcatgaataagctggcattttagcctttagtg 311
Query: 301 aggatctcataggagacccttaacaggagacttctcaacaggagacgtggaagactgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aggatctcataggagacccttaacaggagacttctcaacaggagacgtggaagactgagc 251
Query: 361 aataattgcattttgacaatgttttatgttcaaataagcacacttgtgtc 410
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aataattgcatcttgacaatgttttatgttcaaataagcacacttgtgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
