Query= MSMg01no387_j11.b1 MSMg01no387_j11.b1 CHROMAT_FILE:
MSMg01no387_j11.b1 PHD_FILE: MSMg01no387_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:41 2005
(249 letters)
>mm_chr2_151899418_151900066
Length = 649
Score = 443 bits (229), Expect = e-129
Identities = 244/249 (97%)
Strand = Plus / Plus
Query: 1 tcctttcttttgagaacatcagccaactggaacagggcttaaggaagtaaccaggatgca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tcctttcttttgagaacatcagccaactggaacagggcttaaggaagtaatcaggatgca 260
Query: 61 cagactcctgtcttgtgcttccgatgggatcacacatggacacacactgagactgttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagactcctgtcttgtgcttccgatgggatcacacatggacacacactgagactgttccc 320
Query: 121 tgagatatcatgtgagaaagttgacaccaatatgagcatgcccaggctcttcccttgatg 180
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tgagatttcatgtgagaaacttgacaccaatatgagcatgcccaggctcttccctggatg 380
Query: 181 tgtggacagaggaactggagatctacataccccagaggtgccatgtgagctggaagcata 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tgtggacagaggaactggagatctacataccccagaggtgccatctgagctggaagcata 440
Query: 241 gagtctgga 249
|||||||||
Sbjct: 441 gagtctgga 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no387_j11.g1 MSMg01no387_j11.g1 CHROMAT_FILE:
MSMg01no387_j11.g1 PHD_FILE: MSMg01no387_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:41 2005
(459 letters)
>mm_chr2_152106302_152107164
Length = 863
Score = 876 bits (453), Expect = 0.0
Identities = 459/463 (99%), Gaps = 4/463 (0%)
Strand = Plus / Minus
Query: 1 atcagtctaagtgtcttgttcaaatcacgatccagtgcaaacataatcacaaactgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 atcagtctaagtgtcttgttcaaatcacgatccagtgcaaacataatcacaaactgcatc 604
Query: 61 tctggcacacctggtgctttcagctctgcacaaatccaacatggtgaccctcatagcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctggcacacctggtgctttcagctctgcacaaatccaacatggtgaccctcatagcacg 544
Query: 121 ctagggcacacaagaatcgagtacaataaatagtcactgcaagtggccaaaaagaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctagggcacacaagaatcgagtacaataaatagtcactgcaagtggccaaaaagaagaaa 484
Query: 181 ctcactctgcagtccttttag----ctctatggttgagaaatgttaagaaaagcattagc 236
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 483 ctcactctgcagtccttttagctctctctatggttgagaaatgttaagaaaagcattagc 424
Query: 237 atcctctacttttatcattacattcgctaaagccaccaccttgataaagttactaaagcc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atcctctacttttatcattacattcgctaaagccaccaccttgataaagttactaaagcc 364
Query: 297 aagatgggttacaaagttaggtaagttaattaaattcaactccccaaacaattatgtttt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagatgggttacaaagttaggtaagttaattaaattcaactccccaaacaattatgtttt 304
Query: 357 atctatgatgccaggtgagaaatgcttatgaatctaaaaaggtaggagaatggggaacta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atctatgatgccaggtgagaaatgcttatgaatctaaaaaggtaggagaatggggaacta 244
Query: 417 agattttaggccttaaaatatgttggaagatttgttttcctag 459
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agattttaggccttaaaatatgttggaagatttgttttcctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 863
Length adjustment: 10
Effective length of query: 449
Effective length of database: 853
Effective search space: 382997
Effective search space used: 382997
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
