Query= MSMg01no389_e23.b1 MSMg01no389_e23.b1 CHROMAT_FILE:
MSMg01no389_e23.b1 PHD_FILE: MSMg01no389_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:52 2005
(399 letters)
>mm_chr2_57536513_57537311
Length = 799
Score = 696 bits (360), Expect = 0.0
Identities = 390/400 (97%), Gaps = 2/400 (0%)
Strand = Plus / Minus
Query: 1 attagttttaaatggtagggctcaatgtgtacagattcattagatggcaataggaagtaa 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 434 attagttttaaatggtagggctcagtgtgtacagattcattagatggcaataggaagtaa 375
Query: 61 gacctaatagaaatttccaaacatccaagacatacaggaataaagaagaaaattggagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gacctaatagaaatttccaaacatccaagacatacaggaataaagaagaaaattggagac 315
Query: 121 taaaataatgaatgtcaaattaaaatgcatattagattactgggtactttgggtggttgt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 taaaat-atgaatgtcaaattaaaatgcatattagattactgggtactttgggtgtttgt 256
Query: 181 aacacatgacggagttactagtaggtcactttgta-tttttttagtcaatcatatctttc 239
||||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||||||||||
Sbjct: 255 aacacatgatggagtgactagtaagtcactttgtattttttttagccaatcatatctttc 196
Query: 240 tacctcgcttcaattcctcgctctcttcctttctttcatttctttttttccttcatgcct 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tacctcacttcaattcctcgctctcttcctttctttcatttctttttttccttcatgcct 136
Query: 300 tcctgcctccactataaatgacaacagtgtttatatttgttcctaaattagtcttgcttg 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 135 tcctgcctccactataaatgacaccagtgtttatatttgttcctaaattagtcttgcttg 76
Query: 360 agttagctcccattttgataacctgctctagaagggaatt 399
||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 agttagctcccattttgataacctgctctagaagggaatt 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_e23.g1 MSMg01no389_e23.g1 CHROMAT_FILE:
MSMg01no389_e23.g1 PHD_FILE: MSMg01no389_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:52 2005
(448 letters)
>mm_chr2_57365528_57366375
Length = 848
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgagccccatttttaatggggttatttgattttctggattccagcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagctctgagccccatttttaatggggttatttgattttctggattccagcttc 260
Query: 61 ttgagttctttatatatattggatattagttccctatctgatttaggattggtaaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 261 ttgagttctttatatatattggatattagttccctatctgatttagggtaggtaaagatc 320
Query: 121 ctttcccaatctgttggtggcctttttgttttattgacaatgtcttttgccttacagaat 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttcccaatctgatggtggcctttttgttttattgacaatgtcttttgccttacagaat 380
Query: 181 ctttaaattttatgaggtcccatttgttgattctcaaccttacagtacaagccattgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttaaattttatgaggtcccatttgttgattctcaaccttacagtacaagccattgctg 440
Query: 241 ttctgtttaggaatttttcccctgtgcccgtatcttcgatgcttttacccattttctcct 300
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 441 ttctgtttaggaatttttcccctgtggccgtatctttgatgcttttacccattttctcct 500
Query: 301 ctataagtttcaaacaatgttaaagcagaccaatgcaagctgcctctaaactctctacct 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ctataagtttcaaacaatgttaaagcagaccaatgcaagctgcctttaaactctctacct 560
Query: 361 tcaatatacatgtttctgtatctacctctgcataagctttataattgtttactatatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaatatacatgtttctgtatctacctctgcataagctttataattgtttactatatttc 620
Query: 421 tttaaataccctgtatttaatttataaa 448
||||||||||||||||||||||||||||
Sbjct: 621 tttaaataccctgtatttaatttataaa 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
