Query= MSMg01no389_f06.b1 MSMg01no389_f06.b1 CHROMAT_FILE:
MSMg01no389_f06.b1 PHD_FILE: MSMg01no389_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:53 2005
(367 letters)
>mm_chr18_14646092_14646858
Length = 767
Score = 702 bits (363), Expect = 0.0
Identities = 366/367 (99%)
Strand = Plus / Minus
Query: 1 agttatgtagtgagatcaaggctagcttggatgatatgagaccctgtctcaataagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agttatgtagtgagatcaaggctagcttggatgatatgagaccctgtctcaataagaaaa 569
Query: 61 acaaaaagcccaaaccactgaatgcttatgtctacctaaactatgagaggatgataagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 acaaaaagcccaaaccactgaatgcttatgtctacctaaactatgagaggatgataagag 509
Query: 121 atttctggatgaagcaaaaatcatcacctggccataactttctgagctgtgtgtctaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atttctggatgaagcaaaaatcatcacctggccataactttctgagctgtgtgtctaaca 449
Query: 181 agtggcctttggagagatgaatgtggttggtggcaggtggtcagagctgtggtacatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agtggcctttggagagatgaatgtggttggtggcaggtggtcagagctgtggtacatatc 389
Query: 241 agagctgtacatctgggcttgtaagtttgtttccgtatcttccttctgggcctgttgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agagctgtacatctgggcttgtaagtttgtttccgtatcttccttctgggcctgttgctc 329
Query: 301 ttttagtgaaggcttggaaggggcccccaattccacacaaagccccagagtccctttgtc 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 328 ttttagtgaaggcttggaaggggcccccaattccagacaaagccccagagtccctttgtc 269
Query: 361 tcacagg 367
|||||||
Sbjct: 268 tcacagg 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_f06.g1 MSMg01no389_f06.g1 CHROMAT_FILE:
MSMg01no389_f06.g1 PHD_FILE: MSMg01no389_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:53 2005
(504 letters)
>mm_chr2_151936044_151936954
Length = 911
Score = 497 bits (257), Expect = e-145
Identities = 449/521 (86%), Gaps = 26/521 (4%)
Strand = Plus / Plus
Query: 5 tgcagtaccaggatatccttgaactcacagagatctgcctctactgcctcacaagtgctg 64
|||||||||||| | |||||| ||||| ||||| ||||||| |||| || | |||||||
Sbjct: 196 tgcagtaccaggctggccttgacctcacggagatttgcctctcctgcatcccgagtgctg 255
Query: 65 gtattaaa-aagggtgtgtgctattatcacccaggtacattttttttaaggtgacaaggt 123
|||||||| || |||||| ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 256 gtattaaagaa-ggtgtgcactactatcacccaggtaca-tttttttaaggtgacaaggt 313
Query: 124 ttcttcag-ccctggtgccaggactatgtctctgctggtcagttcattccttagattcaa 182
|||||||| |||| |||||| || | ||| |||| |||||||||| ||||||||||||||
Sbjct: 314 ttcttcagcccct-gtgccaagaatgtgtttctgttggtcagttcgttccttagattcaa 372
Query: 183 ggggtgc----------agctctcgag-gggagtaactataaagaaca-tgggttatcat 230
||| ||| ||||||| || ||||| ||| | |||||||| |||| |||| |
Sbjct: 373 gggttgcaaatggaccgagctctc-agcgggaggaaccacaaagaacattgggctatcgt 431
Query: 231 tcatcacaggtgaatcttggtgggcaagacacagaattcctcactcccacacataagcac 290
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 432 tcatcacagatgaatcttggtgggcaagagacagaattcctcactcccacacataagtac 491
Query: 291 tcccttttcataagtttag-cacagaagcacacaatgggccttgccacgtcagccgttaa 349
||||||||||||||||| | ||||||||||||||| |||||||| || ||||||| ||||
Sbjct: 492 tcccttttcataagttt-gtcacagaagcacacaaggggccttggcatgtcagcctttaa 550
Query: 350 gtaacggttctcaaaacctagaagtcatggcatggtatctccaagagctgggtaacccag 409
|||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||
Sbjct: 551 gtaacggttctcaaaacctagaagtcatggcatggtgtcttcgagagctgggtaccccag 610
Query: 410 ccctaaggatgactcaaaagcagaatgaggtgcataat----tgggcactcagaggggct 465
||||||||||| |||| | ||| ||||||||| ||||| |||||| |||||||||||
Sbjct: 611 ccctaaggatgtctcagaggcacaatgaggtggataatgaggtgggcattcagaggggct 670
Query: 466 -ctgcaaaccaagagtc-aggaggtagtggatgcagcagtg 504
||||||||| |||||| |||||| | ||| ||||||||||
Sbjct: 671 tctgcaaacctagagtccaggaggcaatgggtgcagcagtg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 911
Length adjustment: 10
Effective length of query: 494
Effective length of database: 901
Effective search space: 445094
Effective search space used: 445094
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
