Query= MSMg01no389_f08.b1 MSMg01no389_f08.b1 CHROMAT_FILE:
MSMg01no389_f08.b1 PHD_FILE: MSMg01no389_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:54 2005
(442 letters)
>mm_chr2_96878344_96879184
Length = 841
Score = 627 bits (324), Expect = 0.0
Identities = 412/444 (92%), Gaps = 7/444 (1%)
Strand = Plus / Plus
Query: 5 gaattctctgcgtgtatatttataactgatttttcctttggtaccttggtaagataattc 64
|||||||||| |||||||| ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 205 gaattctctgtgtgtatatatataactgattcttcctttggtaatttggcaagataattc 264
Query: 65 ttgtaataattgtatgaagtcagttacacgttcagttttgattagtaatggaatggcatt 124
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 265 ttgtaataattgtatgaagtcagttacatgttcagttttgattaacaatggaatggcatt 324
Query: 125 gaaaatgaaatgtttgaatgggttgggcataaaaccccctcattttcctagcattagctc 184
|||||||||| ||||||||| |||||| ||||||||| ||||||||||||||| |||||
Sbjct: 325 gaaaatgaaacgtttgaatgagttgggggtaaaaccccatcattttcctagcatgagctc 384
Query: 185 ctgttttttctgac--tatattgaaacatgttggacatgctgaactttgagtct----ta 238
||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 ctg-cttttctgactttatattgaaacatgttggacatgctgaactttgagtcttctgtt 443
Query: 239 tgtttgtttatgtttttgtttttatttttgttcttgtttttaatttattcgttattttct 298
||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 tgtttgtttttgtttttatttttatttttgttcttgtttttaatttattagttattttct 503
Query: 299 tcatttacatttccaatgctatcccaaatgtccctaacagcttctgggacaggtgaaagc 358
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 tcatttacatttcccatgctatcccaaatgtccctaacagcttctgggacaggtggaagc 563
Query: 359 cacacagcttttgagtcttttaaaaacttatttaattcatagtaagaaatgaattgatgg 418
|||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 cacacaactttcgagtcttttaaaaatttatttaattcatagtaagaaatgaattgatgg 623
Query: 419 gctttttgcatttctcattgacaa 442
||||||||||||||||||||||||
Sbjct: 624 gctttttgcatttctcattgacaa 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_f08.g1 MSMg01no389_f08.g1 CHROMAT_FILE:
MSMg01no389_f08.g1 PHD_FILE: MSMg01no389_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:54 2005
(493 letters)
>mm_chr2_97039576_97040468
Length = 893
Score = 855 bits (442), Expect = 0.0
Identities = 487/520 (93%), Gaps = 28/520 (5%)
Strand = Plus / Minus
Query: 1 tgtagaacatacacttatgcatgagtttgtttagggtaacatcacctttccttaatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgtagaacatacacttatgcatgagtttgtttagggtaacatcacctttccttaatacct 474
Query: 61 gttactctaatgagactgaaactcctccttcccttatatcattaaaacattgctgcttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gttactctaatgagactgaaactcctccttcccttatatcattaaaacattgctgcttat 414
Query: 121 atgttaatatgcaactctaatatgtttattttatcttttgttctgtgttcttgcatttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgttaatatgcaactctaatatgtttattttatcttttgttctgtgttcttgcatttgt 354
Query: 181 agtacgtgcattgatatccatatggggacagttacactccactttatttgttcaagtgaa 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aatacgtgcattgatatccatatggggacagttacactccactttatttgttcaagtgaa 294
Query: 241 gatcaaaggcagacatcagatgtctttctcaggcaatcgccattctttttatttctttta 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 293 gatcaaaggcagacatcagatgtctttctcaggcactcgccattctttttatttctttta 234
Query: 301 aatatgttgctaaaattatgtgtgtgtgtg----------------------------tg 332
|||||||||||||||||||||||||||||| ||
Sbjct: 233 aatatgttgctaaaattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg 174
Query: 333 taggtcaaaagtcaactcatgttacttttccccttcctctatatagatttcaggattaaa 392
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 173 taggtcaaaagtcaactcatgttacttttccccttcctctatatagatttcagggttaaa 114
Query: 393 actcaagtggttagtcttggtaacaggttcctttactccctgggccatttcactagccca 452
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 113 actcaagtgtttagtcttggtaacaggttcctttactccctgggccatttcaccagccca 54
Query: 453 ctccatcaactttcgaaacagtctttcattgaacctattg 492
||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ctccatcaactttcgaaacagtctttcattgaacctattg 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
