Query= MSMg01no392_a24.b1 MSMg01no392_a24.b1 CHROMAT_FILE:
MSMg01no392_a24.b1 PHD_FILE: MSMg01no392_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:28 2005
(358 letters)
>mm_chr2_32092482_32093239
Length = 758
Score = 646 bits (334), Expect = 0.0
Identities = 352/358 (98%)
Strand = Plus / Plus
Query: 1 tgtataccctgtgcttgaacacaactgtaattctccaacaggtatgttctggaagagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtataccctgtgcttgaacacaactgtaattctccaacaggtatgttctggaagagtcc 260
Query: 61 ttctggttctattaacccaacccgctatgctgtaaattcatcgtgacgccaggcggcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctggttctattaacccaacccgctatgctgtaaattcatcgtgacgccaggcggcttt 320
Query: 121 aggaccctgtggcctcgtttgtgccttcccgggctgctgtccgtttactttaatggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaccctgtggcctcgtttgtgccttcccgggctgctgtccgtttactttaatggtagt 380
Query: 181 tctttccctcttttccagggagtcctcccgagctggcttttctgcaaaatgttaagattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctttccctcttttccagggagtcctcccgagctggcttttctgcaaaatgttaagattt 440
Query: 241 tttatactttctctagtggtgactgttgacatcaatttgaacttggtagctctgactggc 300
|| | || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaacggcctctagtggtgactgttgacatcaatttgaacttggtagctctgactggc 500
Query: 301 ctgggactacttacccgactatggcaactctcctaccctcggcctgtggtgtaagtag 358
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 ctgggactacttacccgactatggcaactctcctaccctcgggctgtggtgtaagtag 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_a24.g1 MSMg01no392_a24.g1 CHROMAT_FILE:
MSMg01no392_a24.g1 PHD_FILE: MSMg01no392_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:28 2005
(244 letters)
>mm_chr2_32287240_32287882
Length = 643
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 aaaaataaaggaaaacttaaaaaagcaacagtttgggaaattagttcatacataatgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaaaataaaggaaaacttaaaaaagcaacagtttgggaaattagttcatacataatgaac 384
Query: 61 atgtttgtttatctgtaagattctgtgtatttctcacatatacaaatgtatctacagaat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 383 atgtttgtttatctgtaagattctgtgtatttctcacatatac-aatgtatctacagaat 325
Query: 121 aagctaaacgtggggctgcaatgtagagggctggagattttggagagctggtacctgtat 180
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 aagctaaacgtggggctgcaatgtagagggctggagcttttggagagctggtacctgtag 265
Query: 181 ctacatttctttccttgtagtagtgggtaggttgcaggtatccccatcctctcccaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctacatttctttccttgtagtagtgggtaggttgcaggtatccccatcctctcccaagag 205
Query: 241 tttg 244
||||
Sbjct: 204 tttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
