Query= MSMg01no392_p10.b1 MSMg01no392_p10.b1 CHROMAT_FILE:
MSMg01no392_p10.b1 PHD_FILE: MSMg01no392_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:41 2005
(542 letters)
>mm_chr2_75155124_75156065
Length = 942
Score = 1017 bits (526), Expect = 0.0
Identities = 538/542 (99%)
Strand = Plus / Plus
Query: 1 gttagtgtttgccctcacaaatacataataggtagaaattatcagaaaccaataaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gttagtgtttgccctcacaaatacataataggtagaaattatcagaaactaataaataaa 260
Query: 61 gccccaagctttctcttacatagagccaagaggctgctagatgaacctcctccaccgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccccaagctttctcttacatagagccaagaggctgctagatgaacctcctccaccgcac 320
Query: 121 tctgatctcatttctgtgcggccctaacaggggacagtaatgtatgattgagacactgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgatctcatttctgtgcggccctaacaggggacagtaatgtatgattgagacactgct 380
Query: 181 acatttaggaatgacaagatgggcattattaatagcttaattgacattaaggcaattacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatttaggaatgacaagatgggcattattaatagcttaattgacattaaggcaattacc 440
Query: 241 cctatctttattacagtttgtagaattactcagaaaatattggctgagccctttctttcc 300
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctacccttattacagtttgtagaattactcagaaaatattggctgagccctttctttcc 500
Query: 301 ctagagctacccaaggatacagcattttatttcatgccacatctcggctttgacattaga 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ctagagctacccaaggatacagcattttatttcatgccagatctcggctttgacattaga 560
Query: 361 tacttagccatagaatgattccagtaaatcattataaatgcattataataaagatgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacttagccatagaatgattccagtaaatcattataaatgcattataataaagatgttat 620
Query: 421 gagctatcagatattaacccccaacccctaaagagagataaatagttcagttgcttggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagctatcagatattaacccccaacccctaaagagagataaatagttcagttgcttggtt 680
Query: 481 cccactattgtttcatcagaaataagcttttgcaaggagcaactgactaatgaattataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccactattgtttcatcagaaataagcttttgcaaggagcaactgactaatgaattataa 740
Query: 541 aa 542
||
Sbjct: 741 aa 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_p10.g1 MSMg01no392_p10.g1 CHROMAT_FILE:
MSMg01no392_p10.g1 PHD_FILE: MSMg01no392_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:41 2005
(247 letters)
>mm_chr2_75271547_75272193
Length = 647
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 1 cacttctggaaatttacttccttgatgggaccacttgaatagaaatgagaaatgtgtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cacttctggaaatttacttccttgatgggaccacttgaatagaaatgagaaatgtgtgca 388
Query: 61 catgtgtagtcagtattgtttataagagaaattgcaatcagttcaaatcacatccagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 catgtgtagtcagtattgtttataagagaaattgcaatcagttcaaatcacatccagtag 328
Query: 121 ggctcaatgctggggccacaggcatggcatctcatagtattaggactttcaacatgagcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggctcaatgctggggccacaggcatggcatctcatagtattaggactttcaacatgagcg 268
Query: 181 tg-gtcctctggcttcctcaggcacatgcacctgcacatacatgcatgggcagaacatgt 239
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgag-cctctggcttcctcaggcacatgcacctgcacatacatgcatgggcagaacatgt 209
Query: 240 acataaca 247
||||||||
Sbjct: 208 acataaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
