XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACAGA
GATCTGCCTGCCTCTGTCCACTGAGTGCTGGGATTAAAGACACATGTTAC
TATGCCTTACTTTAAAGATTTGTTGTTGTCGTTGTTGTTGTTTTGTTTGA
GATAGGGTTTCTCTGTGTAGCCCTGACTGTCTTGGAACTTTTTCTGTAGA
CCAGGCTGGTTGAACACACAGAGATCTGCCTGCTTTTGCCTCTGGAGTTC
CACATTCCAGGATTTTTTTTTTTAATTGTGTGTATGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGGTTTNNNNNTCGTGTTCTTCTTCTCCTT
CTCGTCCTCACGTTTTCTGTCCTTCTTTAGTTGATCCGTTTTTTTCGCTC
GTCTTATCGCCCGCCCGTTTCTCTGTTACCTCTGTTTTTATTCTGCCTTC
GTTTTCTCTCCCTTTCCTTTCTCTCTCTCTTTTCTTTTTTTTTTCCCCTT
CCGTTTTCTTTTTTATTCCCTGTTCTCCTTATCTTTTTCTGTTTCCTCTT
TTTTCTCCTTCTCCCTCTTTTCTCTCCCTTCCTATTCCCTTCCTCCCTCT
TTTCTTTCTTCTTTCCTTCCTCCTCTCTATATACGTTTTGTTTCCCTCCT
TTTTCCTCCTCTCTCTATTTACCTCTACTCTCTCTTTTTTTTCTCTCTCT
CTCTCCTCTTTCCTTAATCCGTTTCTTCTTCTTTTTCTTCTTTTTTTCCT
ATAATACTCTCTCTCTTCTTCTTTCCTTCCCTTTTTCTTTCTTCTGCTCT
CTACTCACCCCTCATTTCTTACACTTTCCTTCTTTTTTTTCTCCTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCCTAGCTCTACAAGTTGGAGAATGGGAACATTCCC
AAATGTTGAAAGGCACTTATTTTTCCTCTTTTAAGGAGCAATCCAGTTTT
CACAGGAAATTCATTTTGTAGCATTGTTTTGGTTTTAGGTGGCTGTCCTG
TAAGCCAGGCTGTTCACAAGAGCTGCATCTATCTTGAAGTGTGCACAATA
GCCTCTCTTGCGGCTCTCTCTTCCTCTGTTATTGATCCTTACAGATGCTC
CAAGACCCTTCCCCCACCTTTCTCCAAATCCCAACCCCCCATTCTGAAAG
ATAGCTTAAGAAATAAGACTTCCTGCCTAGCGACTGGCAGAGCTGAAAGA
CCAGATTGTATGACTCCACAGATCAGGCCGGCCACAGAGAACGCTTGAAT
AGAGTTAACCCTCTGTGAACTAAAACAAAACATTTGCATGCCCAGCTGTG
ACAAAGGTTAATTTAAATGGACAAGGGCCCAATATCTAAAACCAGGGCAC
ACTTTTTTTTTTTTTTTTTTTTTTACAGTAGCATTTTCACTGACTTTTGT
AAGCAGNCAATTTTGCCTCTTAAGCTTCCAAAGACCTCATTCAGCTGNGA
TAATTAATTTTGCTTTCTGGCAGTTGGATTGAAATTAAAGTGCAACAATA
CTCTTTCTTGGTTTGTACGTGCCCCTTTTTTTATGCCCTTAATTATATTT
TGAA

Query= MSMg01no393_f01.g1 MSMg01no393_f01.g1 CHROMAT_FILE:
MSMg01no393_f01.g1 PHD_FILE: MSMg01no393_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:12 2005
         (534 letters)



>mm_chr2_38637557_38638490
          Length = 934

 Score = 1013 bits (524), Expect = 0.0
 Identities = 533/536 (99%), Gaps = 3/536 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctagctctacaagttggagaatgggaacattcccaaatgttgaaaggcacttatttttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctagctctacaagttggagaatgggaacattcccaaatgttgaaaggcacttatttttc 260

                                                                       
Query: 61  ctcttttaaggagcaatccagttttcacaggaaattcattttgtagcattgttttggttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttttaaggagcaatccagttttcacaggaaattcattttgtagcattgttttggttt 320

                                                                       
Query: 121 taggtggctgtcctgtaagccaggctgttcacaagagctgcatctatcttgaagtgtgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggtggctgtcctgtaagccaggctgttcacaagagctgcatctatcttgaagtgtgca 380

                                                                       
Query: 181 caatagcctctcttgcggctctctcttcctctgttattgatccttacagatgctccaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatagcctctcttgcggctctctcttcctctgttattgatccttacagatgctccaaga 440

                                                                       
Query: 241 cccttcccccacctttctccaaatcccaaccccccattctgaaagatagcttaagaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccttcccccacctttctccaaatcccaaccccccattctgaaagatagcttaagaaata 500

                                                                       
Query: 301 agacttcctgcctagcgactggcagagctgaaagaccagattgtatgactccacagatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacttcctgcctagcgactggcagagctgaaagaccagattgtatgactccacagatca 560

                                                                       
Query: 361 ggccggccacagagaacgc-ttgaatagagttaaccctctgtgaactaaaacaaaacatt 419
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggccggccacagagaa-gccttgaatagagttaaccctctgtgaactaaaacaaaacatt 619

                                                                       
Query: 420 tgcatgcccagctgtgacaaaggttaatttaaatggacaagggcccaatatctaaaacca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgcatgcccagctgtgacaaaggttaatttaaatggacaagggcccaatatctaaaacca 679

                                                                   
Query: 480 gggcacactttttttttttttttttttttt-acagtagcattttcactgacttttg 534
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 680 gggcacactttttttttttttttttttttttacagtagcattttcactgacttttg 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space:   484176
Effective search space used:   484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)