Query= MSMg01no394_p23.b1 MSMg01no394_p23.b1 CHROMAT_FILE:
MSMg01no394_p23.b1 PHD_FILE: MSMg01no394_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:36 2005
(456 letters)
>mm_chr2_179655440_179656292
Length = 853
Score = 816 bits (422), Expect = 0.0
Identities = 443/452 (98%), Gaps = 5/452 (1%)
Strand = Plus / Plus
Query: 5 gaattccaccccattcttttccgagtctggctgaaccccagcagagctgatcatgtgagc 64
|||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 205 gaattccaccccatgcttttccgagtcgggctgaaccccagca----tgatcatgtgagc 260
Query: 65 atgtattttagctctttatacgcataaaaaggtgacttgaaaatcaagtgtccaacgcaa 124
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgttttagctctttatacgcataaaaaggtgacttgaaaatcaagtgtccaacgcaa 320
Query: 125 gaccacacctctatggaaggccaggagctcccctagctcttaaggaaggcgctttcccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccacacctctatggaaggccaggagctcccctagctcttaaggaaggcgctttcccac 380
Query: 185 ccgctccggacctcagcctcctcatgttctgctgtacctctgctcctgatcctggcccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgctccggacctcagcctcctcatgttctgctgtacctctgctcctgatcctggcccag 440
Query: 245 tgcagtccactttcctctttttcctgggcccgatcgctgccagtgcagtgaggttggcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcagtccactttcctctttttcctgggcccgatcgctgccagtgcagtgaggttggcat 500
Query: 305 ctcgttgtcgcatctgtgccagctcctgctgctgcatcttcatgttgggaaggaaacaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcgttgtcgcatctgtgccagctcctgctgctgcatcttcatgttgggaaggaaacaga 560
Query: 365 actatcattgctttgagagttcttactgcaaatgtagcaatcaacagctaccaagaactt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actatcattgctttgagagttcttactgcaaatgtagcaatcaacagctaccaagaactt 620
Query: 425 tctcaagtttcctaaattacaactt-tttttt 455
||||||||||||||||||||||||| ||||||
Sbjct: 621 tctcaagtttcctaaattacaacttctttttt 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 853
Length adjustment: 10
Effective length of query: 446
Effective length of database: 843
Effective search space: 375978
Effective search space used: 375978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_p23.g1 MSMg01no394_p23.g1 CHROMAT_FILE:
MSMg01no394_p23.g1 PHD_FILE: MSMg01no394_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:36 2005
(449 letters)
>mm_chr2_179804360_179805208
Length = 849
Score = 849 bits (439), Expect = 0.0
Identities = 449/457 (98%), Gaps = 8/457 (1%)
Strand = Plus / Minus
Query: 1 ctgcccagcctgagacacacagtgatcctgtctcacaaaaccaggaaaaagccaggtgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctgcccagcctgagacacacagtgatcctgtctcacaaaaccaggaaaaagccaggtgcc 739
Query: 61 gggtcgcacgcttttaattccagtctcgggaaaaagaggccgggaatgtctgagagtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gggtcgcacgcttttaattccagtctcgggaaaaagaggccgggaatgtctgagagtcac 679
Query: 121 ataggtttgtacagtgcgcct--------ccaaccaaccaaacaagggtgaaaatgatag 172
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 678 ataggtttgtacagtgcgcctccgtctaaccaaccaaccaaacaagggtgaaaatgatag 619
Query: 173 ggtgtttaaaaactgtacttcgttcacaaataacaagacagacgtaacatgctcaataaa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggtgtttaaaaactgtacttcgttcacaaataacaagacagacgtaacatgctcaataaa 559
Query: 233 cagaaatgaggtaatggctaaaaaagtgttttaatggaaatggaaagtcttcctcttttt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cagaaatgaggtaatggctaaaaaagtgttttaatggaaatggaaagtcttcctcttttt 499
Query: 293 acaagtttgaacggacactcagtcactgaagcccacgtctgagaacaggtacaacaggaa 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acaagtttgaacggacactcagtcactgaagcccacgtctgagaacaggtacaacaggaa 439
Query: 353 aggaaaacacctcctttctgggccaggcctgtgtctgcccagtgcctctgcggacatctc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aggaaaacacctcctttctgggccaggcctgtgtctgcccagtgcctctgcggacatctc 379
Query: 413 ccatctcccactgtgctatatgctaagtctgcagaga 449
|||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccatctcccactgtgctatatgctaagtctgcagaga 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
