Query= MSMg01no395_k24.b1 MSMg01no395_k24.b1 CHROMAT_FILE:
MSMg01no395_k24.b1 PHD_FILE: MSMg01no395_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:36 2005
(427 letters)
>mm_chr2_46225274_46226100
Length = 827
Score = 600 bits (310), Expect = e-176
Identities = 329/336 (97%), Gaps = 3/336 (0%)
Strand = Plus / Minus
Query: 4 ggaattcataaatatcttccctacctctgtctcccatgtgtagatattttagatacacac 63
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggaattcataaatatcttgactacctctgtctcccatgtgtagatattttagatacacac 277
Query: 64 tacctgattttcctctttagaaaactttcatttcaattttatttttgttttgggacatac 123
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 276 tacctgattttcctctttagaaaactttcatttgaattttatttttgttttgggacatac 217
Query: 124 ttgtaaaatgttatattatacttttattattattatta-ta--attatctttaagaaaat 180
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 216 ttgtaaaatgttatattatacttttattattattattattattattatctttaagaaaat 157
Query: 181 taaattatatattttaataccataattattgttatcatattgaatgaagacacatataca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 156 taaattatatattttaataccataattattgttatcatattgaatgaagacacacataca 97
Query: 241 gaaacttgtaatttaaagaattatttcttttttacatcccaatattagcaacccctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gaaacttgtaatttaaagaattatttcttttttacatcccaatattagcaacccctttct 37
Query: 301 cctattaccccctcaaatatcctaacccccattttt 336
||||||||||||||||||||||||||||||||||||
Sbjct: 36 cctattaccccctcaaatatcctaacccccattttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_k24.g1 MSMg01no395_k24.g1 CHROMAT_FILE:
MSMg01no395_k24.g1 PHD_FILE: MSMg01no395_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:36 2005
(388 letters)
>mm_chr2_46033996_46034783
Length = 788
Score = 716 bits (370), Expect = 0.0
Identities = 383/388 (98%), Gaps = 2/388 (0%)
Strand = Plus / Plus
Query: 1 atgcctacagtcctgggaatgtctttgtggtcttggacttaagaaatattctgaatcaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atgcctacagtcctgggaatgtctttgtggtcttggacttaagaaatattctaaatcaac 260
Query: 61 cttagagctaagatactaaaagagtcttcccaaagaagaaattagatttaattaaattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagagctaagatactaaaagagtcttcccaaagaagaaattagatttaattaaattag 320
Query: 121 atcaaacacctcttttgtgataaaagtggatatatggcaagtaatcatattaactaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaaacacctcttttgtgataaaagtggatatatggcaagtaatcatattaactaaaat 380
Query: 181 tgaattggctataataagggcttaattacttgcaacttaaaattattgaaagtgttcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaattggctataataagggcttaattacttgcaacttaaaattattgaaagtgttcgtg 440
Query: 241 atgggggatataggtcagtaccatgaatgaggccctgcaatggatccctgggaaaaggaa 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgggggatataggtcactaccatgaatgaggccctgcaatggatccctgggaaaaggaa 500
Query: 301 aacaaatagaaaaaaaaaaaaagaaagaaaaggagaaaatagataaaaagttcttcaaaa 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 501 aacaaatagaaaaaaaaaaa--gaaagaaaaggagaaaatagataaaaagttcttcaaca 558
Query: 361 aacaagagtcaagaaaggtatgcttggt 388
||||||||||||||||||||||||||||
Sbjct: 559 aacaagagtcaagaaaggtatgcttggt 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
