Query= MSMg01no397_a05.b1 MSMg01no397_a05.b1 CHROMAT_FILE:
MSMg01no397_a05.b1 PHD_FILE: MSMg01no397_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:18 2005
(510 letters)
>mm_chr2_135933617_135934527
Length = 911
Score = 940 bits (486), Expect = 0.0
Identities = 505/518 (97%), Gaps = 12/518 (2%)
Strand = Plus / Minus
Query: 1 gttaggtccttgattacactgccaaattcagattaatgtgcatttaactaacatggatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gttaggtccttgattacactgccaaattcagattaatgtgcatttaactaacatggatca 459
Query: 61 ggggaattctggctgacagccagctgtaatcggggcaattgatagcggtgaggagtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggggaattctggctgacagccagctgtaatcggggcaattgatagcggtgaggagtttta 399
Query: 121 tgccctgtccactgcagtgcaccactgctgaaattgattgattaaatgaattcattgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgccctgtccactgcagtgcaccactgctgaaattgattgattaaatgaattcattgcta 339
Query: 181 taattacttataatgttgatacatcacaagcctgtacctaaccctatccttggagacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 taattacttataatgttgatacatcacaagcctgtacctaaccctatccttggagacagt 279
Query: 241 gcacttattgtagaatggcattctggctgaactgttaactggggaattatttattctcac 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gcacttattgtagaagggcattctggctgaactgttaactggggaattatttattctcac 219
Query: 301 ataataagtcccc--------ccccacacacacacacac----tgcacatcttgactaga 348
||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 218 ataataagtccccgcccccccccccacacacacacacacacactgcacatcttgactaga 159
Query: 349 gacaggaaaaggcgcatttctttaagaattcatttatgtggtatgctaaaaaatctcagg 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gacaggaaaaggcgcatttctttaagaattcatttatgtggtatgctaaaaaatctcagg 99
Query: 409 aaactaaaaaccaagtgtatgttattaaccaccccaaaagaaagagctccttgttcatct 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aaactaaaaaccaagtgtatgttattaaccaccccaaaagaaagagctccttgttcatct 39
Query: 469 gtctgtatttttaaagattcctgcagagagaatttcct 506
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gtctgtatttttaaagattcctgcagagagaatttcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_a05.g1 MSMg01no397_a05.g1 CHROMAT_FILE:
MSMg01no397_a05.g1 PHD_FILE: MSMg01no397_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:18 2005
(480 letters)
>mm_chr2_135747503_135748382
Length = 880
Score = 928 bits (480), Expect = 0.0
Identities = 480/480 (100%)
Strand = Plus / Plus
Query: 1 actagatacttccttattcttcatcatcagtatgctgtagaataaacaattaagaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagatacttccttattcttcatcatcagtatgctgtagaataaacaattaagaaaaat 260
Query: 61 ctgactctaaccaaattggtggtttctgacatccaaagattgatattcttggttttatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgactctaaccaaattggtggtttctgacatccaaagattgatattcttggttttatta 320
Query: 121 aagttttaaaattcttcgaatattttagagcatcccatatgaatgccagtttgctgaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagttttaaaattcttcgaatattttagagcatcccatatgaatgccagtttgctgaaat 380
Query: 181 aaatgggattacttgaattttttcaaatgccttttgggctttgtaaggatataggtgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgggattacttgaattttttcaaatgccttttgggctttgtaaggatataggtgtgc 440
Query: 241 catggactttgaagtgtattaatagatgttatttatttatgtcaggaagtagagcgagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catggactttgaagtgtattaatagatgttatttatttatgtcaggaagtagagcgagta 500
Query: 301 taaggcccaggttttctttcttctgttcaatatgtaacagtctgtggacagaaatgggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaggcccaggttttctttcttctgttcaatatgtaacagtctgtggacagaaatgggga 560
Query: 361 aagtggagtaagattctatagattcaaaaggacctgttacaagatatctttgaaatcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtggagtaagattctatagattcaaaaggacctgttacaagatatctttgaaatcagg 620
Query: 421 cttaggcaaagcaaaaaacaaaacaaaacaaaacaccctgagtaataccactggacagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttaggcaaagcaaaaaacaaaacaaaacaaaacaccctgagtaataccactggacagat 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
