Query= MSMg01no398_c05.b1 MSMg01no398_c05.b1 CHROMAT_FILE:
MSMg01no398_c05.b1 PHD_FILE: MSMg01no398_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:47 2005
(398 letters)
>mm_chr2_157898684_157899481
Length = 798
Score = 725 bits (375), Expect = 0.0
Identities = 390/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaagagatcc-cacacctctgcctcccaagtactggaattaaaggtgtgcacc 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaattcacaagagacccacacacctctgcctcccaagtactggaattaaaggtgtgcacc 611
Query: 64 actacacccagcagtaatttctcagttcttcaatgccaaatgccttgcacacaggacaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 actacacccagcagtaatttctcagttcttcaatgccaaatgccttgcacacaggacaca 551
Query: 124 atcttgaggatgtatggaaaactattaaagaggactcttccatcaaaccaggaagctctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atcttgaggatgtatggaaaactattaaagaggactcttccatcaaaccaggaagctctg 491
Query: 184 gacacacgcgcctcactccatatccgccacaccccacagtgcccagcacagtagcgagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gacacacgcgcctcactccatatccgccacaccccacagtgcccagcacagtagcgagat 431
Query: 244 aaattagcaacacagagaacaaacatacgtatattaatcttcctcaaacttggacttcag 303
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 430 aaattagcaacacagagaacaaacatacgtataggaatcttcctcaaacttggacttcag 371
Query: 304 gcaacactttcattcctgcaacggaagccacatttaagcctgggctctacaaggccaagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gcaacactttcattcctgcaacggaagccacatttaagcctgggctctacaaggccaagg 311
Query: 364 tcccctgcctctgcctgcaccaatatttacgtggc 398
||||||||||||||||||||||||||||||||||
Sbjct: 310 ccccctgcctctgcctgcaccaatatttacgtggc 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_c05.g1 MSMg01no398_c05.g1 CHROMAT_FILE:
MSMg01no398_c05.g1 PHD_FILE: MSMg01no398_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:47 2005
(206 letters)
>mm_chr2_157708155_157708760
Length = 606
Score = 368 bits (190), Expect = e-106
Identities = 202/206 (98%)
Strand = Plus / Plus
Query: 1 tcccatcagtccctgttgcttgaccacagtttgggagaggggtggtgttctagaagtgct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccatcagtccctgctgcttgaccacagtttgggagaggggtggtgttctagaagtgct 260
Query: 61 gtaggctagagggtggtcagtaaaaactgctgcgtaatgggccgtgcatgggagagcatg 120
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gtaggctagagggtgatcagtaaaaactgctgcgtaacgggccgtgcatgggagagcatg 320
Query: 121 agagagtggcatggtgtgtgcatggtgtctctataatcctgtttcgtttggggaattgtt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 agagagtggcatggtgtgtgcatggtgtctttataatcctgtttcgtttggggaattgtt 380
Query: 181 ttttaaaataagaattggctgcaaag 206
||||||||||||||||||||||||||
Sbjct: 381 ttttaaaataagaattggctgcaaag 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
