Query= MSMg01no400_d02.b1 MSMg01no400_d02.b1 CHROMAT_FILE:
MSMg01no400_d02.b1 PHD_FILE: MSMg01no400_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:25 2005
(165 letters)
>mm_chr2_58016099_58016664
Length = 566
Score = 296 bits (153), Expect = 5e-85
Identities = 159/161 (98%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaggtgctgttggatatgaccttataagggtaaaagaagtttacccagctaag 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggtgctgctggatatgaccttataagggtaaaagaagtttacccagctaag 263
Query: 64 tgacttcctcttgtgaggcaaagggctcacccccacccctgcacagggctacatgcacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgacttcctcttgtgaggcaaagggctcacccccacccctgcacagggctacatgcacca 323
Query: 124 agacatgcaggtatggagtagggttggggg-ttaggggtgg 163
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 agacatgcaggtatggagtagggttggggggttaggggtgg 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 566
Length adjustment: 8
Effective length of query: 157
Effective length of database: 558
Effective search space: 87606
Effective search space used: 87606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no400_d02.g1 MSMg01no400_d02.g1 CHROMAT_FILE:
MSMg01no400_d02.g1 PHD_FILE: MSMg01no400_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:25 2005
(502 letters)
>mm_chr2_58202985_58203886
Length = 902
Score = 940 bits (486), Expect = 0.0
Identities = 498/502 (99%)
Strand = Plus / Minus
Query: 1 agtaagaaggaaaagggagaaggagatggtgagaatgtgaaatgtgttctgaggactgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agtaagaaggaaaagggagaaggagatggtgagaatgtgaaatgtgttctgaggactgct 444
Query: 61 tccacccaagtccacaggccacctcccctcttgtgcatccctgctctgattggctagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccacccaagtccacaggccacctcccctcttgtgcatccctgctctgattggctagcaa 384
Query: 121 ggttctacttgttctgattcttcactccccccacccccaacccccgcctctaaaatcact 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 383 ggttctacttgttctgattcttcactccccccacccccatcccccgcctctaaaatcact 324
Query: 181 taccttttctgttattctcttctgtctttctgagagtaggcatgactgtgtctttggagc 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 323 taccttttctgttattctcttctgtttttctgagagtaggcatgactgtgtctttggagc 264
Query: 241 tgttttaaattagtcctctcaagaattcatggctgaatcattcagtatgactcaagagct 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgttttaaattaatcctctcaagaattcatggctgaatcattcagtatgactcaagagct 204
Query: 301 tgcttattattttttaaaacaatttaaatttgcaatgacttatacgtcccaaattagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgcttattattttttaaaacaatttaaatttgcaatgacttatacgtcccaaattagagc 144
Query: 361 aatctagtttttcattaaacttttcacatagaaataccattggaatgctcaaaatttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 aatctagtttttcattaaacttttcacatagaaataccattggaatgctcaaaatttgaa 84
Query: 421 ggtgaactgcagccccctcccaagtccgtttcgtcatcttaatttcatggcaaggcacaa 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 83 ggtgaactgcagccccctcccaagtctgtttcgtcatcttaatttcatggcaaggcacaa 24
Query: 481 ggacagtgataggtgccacatc 502
||||||||||||||||||||||
Sbjct: 23 ggacagtgataggtgccacatc 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
