Query= MSMg01no403_m23.b1 MSMg01no403_m23.b1 CHROMAT_FILE:
MSMg01no403_m23.b1 PHD_FILE: MSMg01no403_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:14 2005
(445 letters)
>mm_chr2_3482872_3483716
Length = 845
Score = 777 bits (402), Expect = 0.0
Identities = 432/442 (97%)
Strand = Plus / Plus
Query: 4 ggaattcttgccaaaatatcttaaataaaaagtataatatcattttaattcactttgaat 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgccaaaacattttaaataaaaagtataatatcattttaattcactttgaat 263
Query: 64 tataattacttacaagaaaagagggatataaaaccaaacagcagcaaaacattacctaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tataattacttacaagaaaagagggatataaaaccaaacagcagcaaaacattacctaca 323
Query: 124 actatggagatccgattcttgacggttcttgatgggttcctggcacccgtccgccttcct 183
|||||||||||| ||||||||||||||||||||||||||||||||||| || ||| ||||
Sbjct: 324 actatggagatctgattcttgacggttcttgatgggttcctggcacccatctgccctcct 383
Query: 184 gtcttgggtgaccttcctttcttctttcacacttagaaggaaatggcctttcctgccatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcttgggtgaccttcctttcttctttcacacttagaaggaaatggcctttcctgccatt 443
Query: 244 ctcagcagcttatgctgggctcctaaatacagctgtgcatgtcttacaggatataatcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcagcagcttatgctgggctcctaaatacagctgtgcatgtcttacaggatataatcta 503
Query: 304 agttttggtgacaaagaggtctttcttagggcagaggatatccaatatccacaactgtgg 363
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 agttttggtgacaaagaggtctttcttagggcagaggatatccagtatccacaactgtgg 563
Query: 364 agtaggaaatgacaagaaaggagggggagatttgagagtcttatctctgagctctcaatg 423
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 564 agtaggaaatgacaagaaaggagggggagagttgaaagtcttatctctgagctctcaatg 623
Query: 424 gtcaggagtccatatgggcctg 445
|||||||||||| |||||||||
Sbjct: 624 gtcaggagtccagatgggcctg 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_m23.g1 MSMg01no403_m23.g1 CHROMAT_FILE:
MSMg01no403_m23.g1 PHD_FILE: MSMg01no403_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:14 2005
(372 letters)
>mm_chr2_3665757_3666528
Length = 772
Score = 704 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Minus
Query: 1 aaagccaagacaatggcagcagaaagccataaagtctgggacaccaaccaggtatgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaagccaagacaatggcagcagaaagccataaagtctgggacaccaaccaggtatgggag 513
Query: 61 tgccctggcaaaaccactggcccttggcatacttacataacaatgcctttggcacagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgccctggcaaaaccactggcccttggcatacttacataacaatgcctttggcacagtca 453
Query: 121 gcaagagggcagggaggaggtgaaggcgaattttgctggtgtgaaatggactgggccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gcaagagggcagggaggaggtgaaggcgaattttgctggtgtgaaatggactgggccagt 393
Query: 181 tgtggcttggggaatctggcagaaattaataggggtaaggcctcaactatgccaggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 392 tgtggcttggggaatctggcagaaattaataggggtaaggcctcaactatgccgggaatt 333
Query: 241 ctgccccgggcagtccagtctcagtgtggtgtaggactgcatgaacttgggtttgggaaa 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 332 ctgccccgggcagtccagtctcagtgtggtgtaggactgcgtgaacttgggtttgggaaa 273
Query: 301 gaggaaaaaccaggagagttgctaataagttccgacagggcttttccaaacagggttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaggaaaaaccaggagagttgctaataagttccgacagggcttttccaaacagggttaca 213
Query: 361 ttttctctttcc 372
||||||||||||
Sbjct: 212 ttttctctttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
