Query= MSMg01no404_c10.b1 MSMg01no404_c10.b1 CHROMAT_FILE:
MSMg01no404_c10.b1 PHD_FILE: MSMg01no404_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:42 2005
(466 letters)
>mm_chr2_41789701_41790566
Length = 866
Score = 855 bits (442), Expect = 0.0
Identities = 460/466 (98%)
Strand = Plus / Minus
Query: 1 tattattttggttctctgttctaaatattttttgattttattatgaaatttatttactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tattattttggttctctgttctaaatattttttgattttattatgaaatttatttactat 663
Query: 61 ttccatgttttagcctactgggcaaagcacaaactccattatagagatgatattccattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttccatgttttagcctactgggcaaagcacaaactccattatagagatgatattccattt 603
Query: 121 ctctcagcttcatcctccagcatttgttttcgtactaacattatttcagctaaaacacaa 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctttcagcttcatcctccagcatttgttttcgtactaacattatttcagctaaaacacaa 543
Query: 181 ttctttgatcatactcatttacacagtgggcatttgaattttgtttgtcagtgttcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttctttgatcatactcatttacacagtgggcatttgaattttgtttgtcagtgttcagta 483
Query: 241 ttttttgcaatttacactgagatatttctatctatcaccagaatagatattaatgctggg 300
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 482 tttaaagcaatttacactgagatatttctatctatcacaagaatagatattaatgctggg 423
Query: 301 aagctctattaaggataatgacttaatgatgtttgagtgaactaaactatcatttctcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagctctattaaggataatgacttaatgatgtttgagtgaactaaactatcatttctcac 363
Query: 361 attgcttatttctatcttgctgtaacattgtatttattcatttgctagagagatatttat 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 362 attgcttatttctatcttgctgtaacattgtatttattcattcgctagagagatatttat 303
Query: 421 caaagttatatgtgtgtgactgtgtgttgggtgtatgagacttaga 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caaagttatatgtgtgtgactgtgtgttgggtgtatgagacttaga 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_c10.g1 MSMg01no404_c10.g1 CHROMAT_FILE:
MSMg01no404_c10.g1 PHD_FILE: MSMg01no404_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:42 2005
(402 letters)
>mm_chr2_41637950_41638750
Length = 801
Score = 739 bits (382), Expect = 0.0
Identities = 397/402 (98%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 1 tttgctctgactttggatttttttatagtcctataataaccagaagccatggatggctca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tttgctctgactttggatttttttatagtcctataataacctgaagccatggatggctca 260
Query: 61 ttcaaaataagtactttgggaaatagaaagaatagtgtttggagctacatctacagtaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaaataagtactttgggaaatagaaagaatagtgtttggagctacatctacagtaat 320
Query: 121 gcttaaagatatttagatctgcatttgtaaaagttcagcccttggttgcagtaatgatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttaaagatatttagatctgcatttgtaaaagttcagcccttggttgcagtaatgatgc 380
Query: 181 ttgcttactttcataaacatttccaactttaatattactggtttctattttaattttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcttactttcataaacatttccaactttaatattactggtttctattttaattttatt 440
Query: 241 gatataattatgttaaccaggagagaggtgtgattaatgattttctttgtttttttcaac 300
|||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 441 gatataattatgctaagcaggagagaggtgtgattaatgatttcctttgtttttt-caac 499
Query: 301 ctaggtagcataaactgctgtgacttatatgcagatccagaaaactaactgcagaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctaggtagcataaactgctgtgacttatatgcagatccagaaaactaactgcagaagaat 559
Query: 361 atgcatgcaatttcctgtgtgttgtcttcttctttcccataa 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgcatgcaatttcctgtgtgttgtcttcttctttcccataa 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
