MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-404F11
Chromosome	2 (Build37)
Map Location	38,702,758 - 38,702,949
singlet/doublet	singlet
Overlap gene	Nr6a1
Upstream gene	Dennd1a, LOC100040947, Lhx2, Nek6, Psmb7, LOC674251, Nr5a1
Downstream gene	Olfml2a, LOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dennd1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227801 MGI:2442794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040947 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Lhx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16870 MGI:96785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nek6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59126 MGI:1891638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmb7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19177 MGI:107637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674251 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674251
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Nr5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26423 MGI:1346833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nr6a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14536 MGI:1352459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfml2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241327 MGI:2444741
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC624652 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100041071 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	1700123D08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76646 MGI:1923896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66489 MGI:1913739
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arpc5l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74192 MGI:1921442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Golga1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76899 MGI:1924149
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930041I02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320271 MGI:2443716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042584 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042584
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppp6c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67857 MGI:1915107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vmn2r-ps2 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppia-ps2_560.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606733
definition	note : peptidylprolyl isomerase A pseudogene 2_560.1 pseudo : _no_value

name	Dennd1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542026 GeneID:227801 MGI:2442794
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DENN/MADD domain containing 1A transcript_id : NM_146122.2

name	LOC100040947 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249259 GeneID:100040947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040947 transcript_id : XM_001475545.1

name	Lhx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382898 GeneID:16870 MGI:96785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 2 transcript_id : NM_010710.3

name	Nek6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543319 GeneID:59126 MGI:1891638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 6 transcript_id : NM_021606.2

name	Psmb7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755205 GeneID:19177 MGI:107637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) subunit, beta type 7 transcript_id : NM_011187.1

name	Nr5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922643 GeneID:26423 MGI:1346833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 5, group A, member 1 transcript_id : NM_139051.3

name	Nr6a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380165 GeneID:14536 MGI:1352459
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 6, group A, member 1 transcript_id : NM_010264.3

name	Olfml2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378168 GeneID:241327 MGI:2444741
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactomedin-like 2A transcript_id : NM_172854.2

name	LOC624652 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249263 GeneID:624652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to golgi autoantigen, golgin subfamily a transcript_id : XM_889201.2

name	LOC100041071 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249265 GeneID:100041071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041071 transcript_id : XM_001475741.1

name	1700123D08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371002 GeneID:76646 MGI:1923896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700123D08 gene transcript_id : NM_029687.2

name	Rpl35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372816 GeneID:66489 MGI:1913739
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L35 transcript_id : NM_025592.3

name	Arpc5l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312653 GeneID:74192 MGI:1921442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin related protein 2/3 complex, subunit 5-like transcript_id : NM_028809.1

name	Golga1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794191 GeneID:76899 MGI:1924149
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 1 transcript_id : NM_029793.1

name	A930041I02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198338 GeneID:320271 MGI:2443716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930041I02 gene transcript_id : NM_178778.3

name	Ppp6c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359530 GeneID:67857 MGI:1915107
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 6, catalytic subunit transcript_id : NM_024209.2

name	Dennd1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542027 CCDS:CCDS16007.1 GeneID:227801 MGI:2442794
definition	codon_start : 1 exception : mismatches in translation product : DENN/MADD domain containing 1A protein_id : NP_666234.2

name	LOC100040947 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249260 GeneID:100040947
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475595.1

name	Lhx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754538 CCDS:CCDS16008.1 GeneID:16870 MGI:96785
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0007498 - mesoderm development [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : LIM homeo box protein 2 product : LIM homeobox protein 2 protein_id : NP_034840.1

name	Nek6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11037794 CCDS:CCDS16009.1 GeneID:59126 MGI:1891638
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence ISS] [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS]; GO:0030071 - regulation of mitotic metaphase/anaphase transition [Evidence ISS] codon_start : 1 note : NIMA-related expressed kinase 6 product : NIMA (never in mitosis gene a)-related expressed kinase 6 protein_id : NP_067619.1

name	Psmb7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755206 CCDS:CCDS16010.1 GeneID:19177 MGI:107637
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005839 - proteasome core complex (sensu Eukaryota) [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004298 - threonine endopeptidase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : proteasome (prosome, macropain) subunit, beta type 7 protein_id : NP_035317.1

name	Nr5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20522231 CCDS:CCDS16011.1 GeneID:26423 MGI:1346833
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030325 - adrenal gland development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IGI]; GO:0001553 - luteinization [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0009888 - tissue development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : steroidogenic factor 1; adrenal 4-binding protein; fushi tarazu 1 factor homolog product : nuclear receptor subfamily 5, group A, member 1 protein_id : NP_620639.1

name	Nr6a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753956 CCDS:CCDS16012.1 GeneID:14536 MGI:1352459
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IMP] [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : germ cell nuclear factor product : nuclear receptor subfamily 6, group A, member 1 protein_id : NP_034394.1

name	Olfml2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370292 CCDS:CCDS16013.1 GeneID:241327 MGI:2444741
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016524 - latrotoxin receptor activity [Evidence IEA] codon_start : 1 note : photomedin-1 product : olfactomedin-like 2A protein_id : NP_766442.1

name	LOC624652 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249264 GeneID:624652
definition	codon_start : 1 product : similar to golgi autoantigen, golgin subfamily a protein_id : XP_894294.2

name	LOC100041071 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249266 GeneID:100041071
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475791.1

name	1700123D08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037455 GeneID:76646 MGI:1923896
definition	codon_start : 1 note : novel WD domain, G-beta repeat domain containing protein (1700123D08Rik) product : hypothetical protein LOC76646 protein_id : NP_083963.1

name	Rpl35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385044 CCDS:CCDS16015.1 GeneID:66489 MGI:1913739
definition	codon_start : 1 product : ribosomal protein L35 protein_id : NP_079868.1

name	Arpc5l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312654 GeneID:74192 MGI:1921442
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030833 - regulation of actin filament polymerization [Evidence IEA] codon_start : 1 product : actin related protein 2/3 complex, subunit 5-like protein_id : NP_083085.1

name	Golga1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794192 CCDS:CCDS16016.1 GeneID:76899 MGI:1924149
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA] codon_start : 1 product : golgi autoantigen, golgin subfamily a, 1 protein_id : NP_084069.1

name	A930041I02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198339 GeneID:320271 MGI:2443716
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320271 protein_id : NP_848893.2

name	Ppp6c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312758 CCDS:CCDS16017.1 GeneID:67857 MGI:1915107
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] codon_start : 1 product : protein phosphatase 6, catalytic subunit protein_id : NP_077171.1

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 1 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 2 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 3 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 4 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 5 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 6 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 7 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 8 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 9 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 10 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 11 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 12 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 13 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 14 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 15 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 16 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 17 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 18 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 19 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 20 pseudo : _no_value

name	LOC674251 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674251
definition	number : 21 pseudo : _no_value

name	LOC100042584 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042584
definition	number : 2 pseudo : _no_value

name	LOC100042584 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042584
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps2 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041126
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps2 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041126
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps2 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041126
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps2 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041126
definition	number : 4 pseudo : _no_value

clone name	MSMg01-528I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071L09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-074C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-404F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120C08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-383D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-302C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-150J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-404F11.T7 (MSMg01no404_f11.b1)	MSMg01-404F11.TJ (MSMg01no404_f11.g1)
ACC	AG503033	AG503034
length	747	1,307
length of high quality (start - end)	196 (110 - 305)	---
definition	CHROMAT_FILE: MSMg01no404_f11.b1 PHD_FILE: MSMg01no404_f11.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:18:58 2005	CHROMAT_FILE: MSMg01no404_f11.g1 PHD_FILE: MSMg01no404_f11.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:18:59 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TGCGACGCAAAANGAACCACTTTCGTACACGGTCCGCGGAANNCCGGATT CCCAAACAGTTAAGNTTAAGAACTCATTCAACACTTTGCTGGGGAGTTGG GTAATGACATTCTGTTATCTGGTCTCCATTTGGTAGAAATAGCTTATGAA CTGGTGCTGCCAGCCAGTCTTACCCTCTTTTTACATTGACTTGGACAGTG ATGGTTCCTGCAAAAGGAGCTGTTTATACTTCACTATTTTTTGTACTAAT TGCAGACACCAGTTATTATGATTACAACTTCTAAAAGAAATTACCAAATG ATTTTACTTCATTAACATTGAATGAATTTAACCTTTGGAAGTGATCCAGT ATGGCTACTCTGAGTCTAGTTTTAAGTTAGGGCGAATAAATATGTTACTT CAGTGCAATGCTCATAAAGAAGTCTGCTGAATACAGAGTGTCTCCTTCAG TACTGGTAACGAGGAAACAGAGCTTCCCCAGCTTATGGCTTGATGGGCCA GTTACATGCCTCCATTGGTTATAGTGTTTGCTGTCACTCCTGACATCTGC ATGTTTATCCCTGAAACTCACCTGTTAAAACCTTTTCCTATAGATTGTGT TCTGACACCCGCTCTTGTCTTTGTGGCCTACATTGTGCTCTCTTTTTTTG CTTATGTGAATGCACCCACCCCGCCCCATACCCCTACTTCACCCCCACTT TCTTTTTCCATTATTCGCTCCCCCCTATTCTTATATTTTTTTCCCTA	GCCTGGCTGGCGNCGTGTGCCGTTGCCAGGATCGTGCAATACCGCGCCGC GTCCGCCACAAATCACCGCCGGATATACATTCACCCTCCCTCCAGCTCCC TACACACGCACCTACTTTATGTCCTCACGCTGATACAATCTCGCACCCTG CTTTATATATTAGCGAATGCCACTCGTAGGCACAGCAAGGTAGCGGTAGA GACAGGAGAGTGACGAGAGCATGTAGTGAGATAGATGCTGGCCGTCGACG AGACGTGCGGTAGGACGATGTGTGCGTAATGTAATAAATCGCGTCATGAT ATAATCATATGTCATTGCACGCTCAGTGCGTTAATACATAGCTGTACGCA TCTAGTAANTAAACTAATGACGATAACATGAATAGTAACCGAAGATAGGT ATCACACGAAGAATCACGAAATCNGTGTATGGTACGGTTTCGTCTCGGCA GACGACGGTATACGTACGACCACACGCGCGCGCATCACCAACCGAAGAGA TATGCCACGCACTGAAGAATTGATAGCAGACACGCTCAGACATTTGTATC ATGCAGAGCGCGCGCACGATCACGACTACTAACTCATATCCAATTNCGCC TATATATACATATCACAACATCATACGCCAATATAATAGTCCGCTCATCA CAAGATATATTGTAGATACACACTACCATCGAATAGTTCAAACATGGTTG AAAGTAATGACATAGAGATAGCATAGTNAGAACAAGAAATGAAAATAATA GTGATATCAAGGCAGAGTCTAGAGTATATCCTGCAAGTATAATGTGTCGA TATAGGACAGTACATATACCTCCGCGTGCTTCACATACGCATGACAGTCG ACTCTGCGGACGGCGCAGACTGACAGGTAGAGATCGAANTCATTATGCGG CCGACGATCGCGCTGTGATTGTGCGTTAGTNACGATCACGCGCGACGTGT AGTTAATATGTGTGACATGACGNTCATCGAGTGATAAAGAGTATACGCGA CGTAGTACAGCGCCAANCATAGGTAAATGCGNACTGTATTTNGTGAGACG AGGCAGCAGTACGAGTTAGTATGATGAGAAGCGAGACAGTAGATACATGT ATATACACGCCCACACCTCATCNTACTATATTATAAGTAGAATAGGAATT GATAGCACGTNTGACATCGATACCGAATCATGATTCATACGAGATCAGCC TGTATGCTNTTGTGTGATAGNTATGATCGTAGAGTTACTAGATTGNGATA AATTGATGTTNACGCTGTCCCCGATGAAGATATAGAGCGAGATGAGATTA GTGTATN
quality values	Open. Hide. 9 10 9 9 10 10 15 10 11 9 17 3 0 3 7 7 7 6 6 6 6 7 6 6 6 6 6 6 6 6 6 8 10 11 17 22 30 35 22 19 3 0 0 3 10 9 7 7 7 8 6 6 6 6 6 6 10 11 11 11 12 9 16 3 0 3 27 21 37 44 37 31 19 19 15 17 13 22 11 10 10 15 17 24 35 43 57 48 48 43 43 39 39 37 39 35 28 20 21 11 11 11 15 15 20 22 21 13 12 12 19 24 34 36 39 36 39 37 43 37 43 48 48 37 37 37 40 40 43 37 30 22 30 20 25 23 26 24 24 31 37 37 40 26 15 8 8 10 15 26 43 43 43 40 43 46 57 57 48 48 48 48 57 46 37 37 35 39 42 46 43 57 48 48 57 59 59 68 68 68 59 57 44 39 39 41 46 48 48 48 42 44 30 30 30 44 37 29 29 19 24 24 21 22 25 43 43 59 47 42 35 35 35 35 39 39 43 40 40 39 47 35 35 35 39 43 48 48 48 37 37 37 24 24 15 15 18 19 24 34 30 39 39 40 40 41 47 48 43 43 37 34 33 25 28 28 33 33 43 34 32 23 23 20 34 32 48 48 57 57 54 54 47 59 43 37 37 40 40 48 43 47 46 47 43 39 39 37 43 43 48 48 43 39 39 35 32 34 22 22 15 11 11 12 6 3 3 3 6 6 6 6 11 12 9 11 11 23 22 39 39 43 43 43 43 43 48 43 43 43 48 48 59 59 59 59 59 43 39 39 32 35 39 42 42 40 36 28 25 25 30 29 21 21 24 24 24 32 37 37 28 31 20 29 25 36 28 28 21 25 25 40 40 37 30 21 21 18 12 12 12 15 18 13 24 13 17 17 24 24 28 33 33 32 28 28 32 28 24 24 18 17 17 18 20 23 26 22 12 11 11 11 15 12 12 12 12 22 20 12 12 12 15 24 21 19 24 12 15 12 18 16 21 13 14 14 13 15 13 17 12 17 10 10 10 23 21 18 13 13 15 21 28 21 11 11 8 8 8 8 8 8 13 11 12 12 21 19 12 12 12 12 12 23 23 16 13 12 12 12 15 12 14 19 21 16 10 10 10 9 9 13 22 23 12 11 10 10 14 9 9 9 10 10 13 12 12 12 12 12 12 12 11 12 12 13 10 9 9 9 10 10 8 8 8 8 15 17 20 25 20 18 11 11 11 11 8 10 8 8 8 8 9 9 10 14 10 13 12 10 10 8 8 8 8 10 10 13 13 19 15 13 10 9 12 12 9 9 11 10 10 10 10 9 9 9 9 9 10 10 10 10 10 10 13 19 21 21 15 10 9 9 9 9 9 13 6 9 9 12 15 23 16 23 14 14 13 12 10 13 13 11 11 11 13 15 7 7 8 8 8 8 8 8 11 13 10 8 8 8 8 8 8 6 6 6 8 8 14 11 10 10 10 8 8 8 8 9 8 10 10 10 10 10 10 9 9 9 10 10 10 10 8 8 8 8 8 8 10 12 10 13 14 16 16 13 11 11 11 14 13 11 9 9 9 12 12 10 10 8 9 9 11 11 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 9 8 8 8 8 8 8 10 10 10 18 8 10 6 6 8 8 10 10 10 11 9 11 11 16 16 19 16 13 11 10 8 8 6 6	Open. Hide. 6 8 8 8 8 10 6 6 6 6 9 3 0 3 8 8 6 6 8 8 10 10 8 8 8 8 8 8 8 8 9 10 10 6 6 6 6 6 6 6 6 6 8 10 8 8 9 10 10 10 17 8 8 6 6 6 6 6 6 6 8 6 6 6 6 8 8 8 8 13 10 10 12 8 8 8 8 8 8 10 6 6 6 6 10 6 6 6 11 6 6 6 6 6 6 6 6 6 8 6 8 6 6 8 6 6 6 6 6 8 8 8 8 7 9 9 9 10 11 11 8 8 8 8 8 8 8 8 8 8 9 9 9 10 10 8 9 8 10 8 8 8 8 9 10 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 12 10 10 8 8 8 8 9 6 6 6 6 6 6 6 6 9 8 6 7 6 8 6 6 6 6 6 8 6 6 6 6 6 8 6 6 6 6 6 6 11 12 11 8 8 8 9 8 6 6 6 6 6 6 6 6 8 6 8 8 8 9 11 11 8 10 6 6 6 6 8 8 8 8 8 11 8 8 6 6 6 6 8 8 6 6 6 6 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 10 11 11 10 8 10 8 8 8 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 7 6 6 7 7 6 6 10 10 10 10 10 11 11 8 8 6 6 6 6 7 8 6 8 8 10 11 13 8 8 8 8 8 8 12 11 11 11 9 9 8 8 8 8 11 11 11 11 10 11 9 8 10 3 0 3 10 10 10 10 9 9 9 6 6 6 6 8 7 8 11 8 8 8 6 6 6 6 8 10 10 8 8 8 8 8 10 10 8 8 6 6 6 6 6 6 8 8 6 6 6 6 8 8 8 6 6 8 8 10 8 8 8 8 8 8 10 10 3 0 3 6 8 8 10 8 10 6 6 6 6 6 8 8 10 10 10 11 11 10 8 8 8 6 6 6 6 8 8 8 6 6 6 10 10 8 8 8 8 8 8 8 8 8 8 10 10 6 6 6 7 8 8 8 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 10 8 9 9 9 9 8 8 8 8 8 6 8 6 6 10 6 8 8 8 8 8 9 6 6 6 6 8 6 10 10 10 10 10 6 6 6 7 7 10 10 8 8 8 8 9 6 6 6 6 6 6 8 10 10 10 10 10 10 10 8 8 8 8 8 6 6 6 6 6 7 10 6 9 7 6 6 8 8 10 7 8 8 8 11 10 8 6 7 7 7 6 8 8 13 10 8 6 6 6 6 3 0 3 6 6 6 6 8 8 8 8 9 10 9 9 9 9 10 10 12 14 11 10 8 8 8 6 6 6 6 6 6 8 11 11 12 11 10 10 9 9 8 8 6 8 8 6 6 6 7 7 7 7 7 7 10 9 9 8 8 8 8 8 8 10 10 8 8 8 10 8 8 6 6 6 6 8 8 8 8 7 7 8 8 8 9 9 8 8 8 8 10 10 11 14 18 13 10 9 10 10 9 9 9 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 9 9 9 9 9 6 6 6 6 8 6 10 3 0 3 6 6 6 6 6 13 15 12 10 7 6 6 6 8 8 8 8 8 8 8 8 6 6 6 6 6 8 6 8 8 8 6 6 6 6 6 6 6 7 9 10 10 10 10 11 10 10 10 8 8 8 8 6 8 6 6 6 6 6 8 8 8 8 8 10 11 9 9 9 9 9 8 10 8 8 6 8 6 6 6 6 6 6 8 8 10 13 6 6 6 6 8 10 10 10 10 10 10 7 7 7 8 8 8 10 11 11 10 10 10 10 10 12 12 12 11 9 9 9 10 9 10 8 6 6 6 6 8 6 6 7 7 6 8 8 8 6 6 8 6 8 8 8 6 6 6 7 8 8 11 8 8 8 8 8 8 8 8 3 0 3 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 9 9 9 9 11 9 9 9 9 9 13 10 11 10 11 15 15 10 10 8 6 6 6 6 3 0 3 11 11 9 9 9 9 9 13 10 8 6 6 6 6 6 6 6 6 6 7 7 12 12 14 17 16 15 12 8 8 6 6 6 6 6 8 8 9 10 3 0 3 6 8 8 8 6 10 7 6 8 6 6 6 6 6 6 6 6 8 8 8 8 8 8 10 10 12 10 6 6 6 6 8 10 8 8 9 8 8 8 8 6 3 0 3 6 6 6 10 8 8 8 12 11 8 10 10 3 0 3 6 6 6 8 6 7 7 3 0 3 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 6 8 6 6 6 6 9 9 10 10 10 10 8 7 6 6 7 6 6 6 7 10 6 6 6 8 8 6 6 7 7 10 6 6 6 6 11 15 13 8 8 8 7 7 6 6 6 6 6 8 11 9 8 8 8 8 8 3 0 3 6 6 8 8 8 13 11 11 11 8 6 6 6 6 6 6 6 8 8 9 9 8 8 8 8 8 8 8 10 9 9 10 10 10 11 3 0 3 7 8 8 8 8 10 10 15 10 9 9 6 6 6 6 6 6 6 6 8 10 9 10 15 10 10 8 8 8 8 8 8 10 6 6 6 6 8 8 8 8 8 8 10 10 3 0 3 12 12 12 6 6 6 6 8 8 3 0 3 8 6 7 6 6 6 6 6 6 8 8 8 8 6 6 6 6 6 8 8 6 6 3 0 3 8 8 6 7 7 7 6 6 6 6 6 9 3 0 3 8 8 6 6 6 6 6 6 6 8 8 10 8 8 10 9 9 9 9 9 9 9 8 8 8 8 6 6 9 8 8 6 6 6 6 6 8 6 9 9 7 7 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no404_f11.b1 MSMg01no404_f11.b1 CHROMAT_FILE:
MSMg01no404_f11.b1 PHD_FILE: MSMg01no404_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:58 2005
         (196 letters)



>mm_chr2_38702558_38703153
          Length = 596

 Score =  325 bits (168), Expect = 1e-93
 Identities = 186/192 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctgttatctggtctccatttggtagaaatagcttatgaactggtgctgccagccagtc 60
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 392 ttctgttatctggtctccatttggtagaaatagcttaggaactggtgctgccagcccgtc 333

                                                                       
Query: 61  ttaccctctttttacattgacttggacagtgatggttcctgcaaaaggagctgtttatac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 332 ttaccctctttttacattgacttggacagtgatggttcctgcaaaaggagctgtttatat 273

                                                                       
Query: 121 ttcactattttttgtactaattgcagacaccagttattatgattacaacttctaaaagaa 180
           |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttcactaaattttgtgctaattgcagacaccagttattatgattacaacttctaaaagaa 213

                       
Query: 181 attaccaaatga 192
           ||||||||||||
Sbjct: 212 attaccaaatga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space:   110544
Effective search space used:   110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information