Query= MSMg01no405_a23.b1 MSMg01no405_a23.b1 CHROMAT_FILE:
MSMg01no405_a23.b1 PHD_FILE: MSMg01no405_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:56 2005
(390 letters)
>mm_chr2_30406995_30407783
Length = 789
Score = 692 bits (358), Expect = 0.0
Identities = 382/394 (96%), Gaps = 9/394 (2%)
Strand = Plus / Minus
Query: 1 caagtctaggccacatgagactctgtctcaaaagtaaataaacaagcagacacagcgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 caagtctaggccacatgagactctgtctcaaaagtaaataaacaagcagacacagcgaga 725
Query: 61 gacactcataggacggcaagatggctcagttggtgaagacgctgagtctgcttccccaca 120
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gacactcataggatggcaagacggctcagttggtgaagacgctgagtctgcttccccaca 665
Query: 121 tgggaggagagagccagctttcccaagtcaccttcgggcccccacacggataccatggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgggaggagagagccagctttcccaagtcaccttcgggcccccacacggataccatggta 605
Query: 181 tgtatgcacacacactggtgcacccacacggacactaaaaaaaaataaaactaaaaacaa 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 604 tgtatgcacacacactggtgcacccacacggacactaaaaaaaa-taaaactaaaaacaa 546
Query: 241 agaacagacctgtttt----agtcttccggagaattcggtgagaatattaaatgagacat 296
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agaacagacctg----gcagagtcttccggagaattcggtgagaatattaaatgagacat 490
Query: 297 gtgctcatactcctggtgcctggctcggagatgcaacacagcacagcacacagcggcctc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtgctcatactcctggtgcctggctcggagatgcaacacagcacagcacacagcggcctc 430
Query: 357 ggccatctctacatcttgttcctgtctcctctgt 390
|||||||||||||||||||||||||||||||||
Sbjct: 429 agccatctctacatcttgttcctgtctcctctgt 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 789
Length adjustment: 9
Effective length of query: 381
Effective length of database: 780
Effective search space: 297180
Effective search space used: 297180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_a23.g1 MSMg01no405_a23.g1 CHROMAT_FILE:
MSMg01no405_a23.g1 PHD_FILE: MSMg01no405_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:56 2005
(379 letters)
>mm_chr2_30205373_30206151
Length = 779
Score = 710 bits (367), Expect = 0.0
Identities = 376/379 (99%)
Strand = Plus / Plus
Query: 1 catctaatgtcctagaggcttgcagagtgcccagcccagttacaggcactgtgagtctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctaatgtcctagaggcttgcagagtgcccagcccagttacaggcactgtgagtctgc 260
Query: 61 ccacctcatacatgtctgtctagagccactagagttccctggggtggggacagagaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacctcatacatgtctgtctagagccactagagttccctggggtggggacagagaccat 320
Query: 121 ggcctgaccaggcagcgcagtctagccccagccaaggaggaagagcatgctaaacaccag 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacctgaccaggcagcgcagtctagccccagccaaggaggaagagcatgctaaacaccag 380
Query: 181 gtccctgcacactccaccccagtgcctggaagcaaggaggggcaggagcacttaccgtgg 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 gtccctgcacactccaccccagtgcctggaagcaaggaggggcaggagtacttaccgtgg 440
Query: 241 ctttggcttcggctgccttggccttctttagccgggctttgcaggcatccaggtcaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttggcttcggctgccttggccttctttagccgggctttgcaggcatccaggtcaagac 500
Query: 301 gccggttctgcaggagccgcctctccttctgcagggatgacagggacagtgagacgggtc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gccggttctgcaggagccgcctctccttctgcagggatgacagggacagtgagacgggcc 560
Query: 361 agacctggccagacctgac 379
|||||||||||||||||||
Sbjct: 561 agacctggccagacctgac 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
