Query= MSMg01no405_m12.b1 MSMg01no405_m12.b1 CHROMAT_FILE:
MSMg01no405_m12.b1 PHD_FILE: MSMg01no405_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:52 2005
(243 letters)
>mm_chr2_121781829_121782471
Length = 643
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Plus
Query: 1 aggcggcagaaacttcagcctcttcacggtagtaaaagttggtttcccctcccccgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcggcagaaacttcagcctcttcacggtagtaaaagttggtttcccctcccccgctgc 260
Query: 61 cgcccaggcctcccgcattccttccctcccgcctctccggatcggggcgggcgggggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgcccaggcctcccgcattccttccctcccgcctctccggatcggggcgggcgggggagg 320
Query: 121 agggagccagagcgcctgcgcagggaggccgctttccatccgggtccctgtccgtgtttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 agggagccagagcgcctgcgcagggaggccgctttccatccgggtccctgtccgtgcggt 380
Query: 181 gcagcaggtcggtaggcgggaaatggcgactggctgaaggagctggttctgttgctgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagcaggtcggtaggcgggaaatggcgactggctgaaggagctggttctgttgctgctg 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_m12.g1 MSMg01no405_m12.g1 CHROMAT_FILE:
MSMg01no405_m12.g1 PHD_FILE: MSMg01no405_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:52 2005
(263 letters)
>mm_chr2_121953133_121953796
Length = 664
Score = 493 bits (255), Expect = e-144
Identities = 261/263 (99%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 1 tcccttaaag-cacatgaccagtggagaaagacaaagccttcccagtataagtgaggtga 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tcccttaaagtcacatgaccagtggagaaagacaaagccttcccagtataagtgaggtga 404
Query: 60 cttaacccccctgcagcctattcctaaactgttaatcatcatctcaggaaggagggggat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cttaacccccctgcagcctattcctaaactgttaatcatcatctcaggaaggagggggat 344
Query: 120 cctgacctttttagccttgaggataaaggagaggaccatgcagttactgtcctggctgtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cctgacctttttagccttgaggataaaggagaggaccatgcagttactgtcctggctgtt 284
Query: 180 gaaatgattggcttttgatgccctaaccttgtttctgtggaaacaaaacgagaagacagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaaatgattggcttttgatgccctaaccttgtttctgtggaaacaaaacgagaagacagt 224
Query: 240 gtgttgtgtgtgtgtgtgtgtgg 262
||| |||||||||||||||||||
Sbjct: 223 gtggtgtgtgtgtgtgtgtgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 664
Length adjustment: 9
Effective length of query: 254
Effective length of database: 655
Effective search space: 166370
Effective search space used: 166370
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|