NCCATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTAGGTTGCGCAGTCTCTGAATATCTTTTGCTTTAGTTTCTG
CTCCACTTTATATCCCTTCATTTCCTATAGACATAAACATCAAGTTTAAC
AGATAAGCAGTGTACATATAGTTAATTATCAATGCTGATAACATCAAAAC
AGACATAAGGATTCTATGTAGAGCATAGTAAATTCTGCAGCACATAAGTG
CAGGTGTAGAGAATGTTGCAAATATGATCTCCTTAGTCAAATCACTGAAG
ATAGAATTTTTTGTTTCAGATTCCTTCTATAATTATCTAATAAAAGCTGC
TTCTGAATTGTCTCCAATATTTAGGAAGGGTTACCTCTTCATTTAAAAAC
ATGTATCCAATAACTTGATAACTAATAACATTTATGGTTTTTGTTTCTGT
ACTCAGCTTAGCTGTTACTCACCTATCTGTTCCCCAGTAAAGCAATGATG
ATATAATTTTTTCCCATATATGAGGACTCCTCAGTTAGCATCTGGATACA
CACTGAGAGAATTATAATCAATGTATGAAGAATTATACCCTAAGTAGGAA
AATGTATTGTACACTGAAAAACAAATGAATTCAGTAGCAGAAATATCAAA
TATCCTACTGCACAATTACTGTCTTACAGCAATTATTTGTATCCCAAATT
AAATTTTTATGAAGCATTCCTGTAACAATTTTAATA

NCTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTATAAAGTCTTTGATTTTCTCTT
TATTTCTTTTCTGATCAAATTATCATTGAGCAGAGAGTTGTTTAGTTTCC
ATGAGTATGTGAATTTTCTGTTATTTTGATGTAATTGAAGTCTAGCCTTA
GTCCATGGTGATCTGATAGAATGAGTGGTATTATTTCAATATTTTTGTAT
CTGTTTATGTCTAATGTCCAATTATATGGTCAATTTTGGAGAAGGTTTCA
TGAGGTGCTGAGAAGAAGGTATATTTTCTTATTTTGGGGTGAAATGTTGT
AAAGATATCTATAAAATCCATATGGTTCATAACTTCTGTTAGTTTCACTG
TATCTCTGTGGGGCTGTGAATGGCAGCCTATTTTGGGTGAATGAGGCTTG
CTCCAGTGACCCAGTAGAAAACTCTACAAGGGAGAGAACAGTGGGCCACA
TTCCCAGAGAAGGTGCCTGAAACCACAAAGCCCCCACCTCCATATTTCTG
TGACAATTAGTCACACAGACAACATCCCTAGCTCCTTGAATTCTGGTTAG
ACTCCCCCCCAACAGTTACCTAACTATATCCCGGGATGCTCTTTTCCTCA
TTTATCTGGGTTTTCCGCCCGACAGCCCTTCTTTTTTATAATTGGGCTGC
TTGGGTCCCTTTTTCGGTTTTTTTAGACGCTTCCCC

Query= MSMg01no406_a20.b1 MSMg01no406_a20.b1 CHROMAT_FILE:
MSMg01no406_a20.b1 PHD_FILE: MSMg01no406_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:14 2005
         (616 letters)



>mm_chr2_97690831_97691846
          Length = 1016

 Score = 1168 bits (604), Expect = 0.0
 Identities = 610/612 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctaggttgcgcagtctctgaatatcttttgctttagtttctgctccactttata 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gaattcctaggtggggcagtctctgaatatcttttgctttagtttctgctccactttata 844

                                                                       
Query: 65  tcccttcatttcctatagacataaacatcaagtttaacagataagcagtgtacatatagt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 tcccttcatttcctatagacataaacatcaagtttaacagataagcagtgtacatatagt 784

                                                                       
Query: 125 taattatcaatgctgataacatcaaaacagacataaggattctatgtagagcatagtaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 taattatcaatgctgataacatcaaaacagacataaggattctatgtagagcatagtaaa 724

                                                                       
Query: 185 ttctgcagcacataagtgcaggtgtagagaatgttgcaaatatgatctccttagtcaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttctgcagcacataagtgcaggtgtagagaatgttgcaaatatgatctccttagtcaaat 664

                                                                       
Query: 245 cactgaagatagaattttttgtttcagattccttctataattatctaataaaagctgctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cactgaagatagaattttttgtttcagattccttctataattatctaataaaagctgctt 604

                                                                       
Query: 305 ctgaattgtctccaatatttaggaagggttacctcttcatttaaaaacatgtatccaata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctgaattgtctccaatatttaggaagggttacctcttcatttaaaaacatgtatccaata 544

                                                                       
Query: 365 acttgataactaataacatttatggtttttgtttctgtactcagcttagctgttactcac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 acttgataactaataacatttatggtttttgtttctgtactcagcttagctgttactcac 484

                                                                       
Query: 425 ctatctgttccccagtaaagcaatgatgatataattttttcccatatatgaggactcctc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctatctgttccccagtaaagcaatgatgatataattttttcccatatatgaggactcctc 424

                                                                       
Query: 485 agttagcatctggatacacactgagagaattataatcaatgtatgaagaattatacccta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agttagcatctggatacacactgagagaattataatcaatgtatgaagaattatacccta 364

                                                                       
Query: 545 agtaggaaaatgtattgtacactgaaaaacaaatgaattcagtagcagaaatatcaaata 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agtaggaaaatgtattgtacactgaaaaacaaatgaattcagtagcagaaatatcaaata 304

                       
Query: 605 tcctactgcaca 616
           ||||||||||||
Sbjct: 303 tcctactgcaca 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)