CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCATCTGAGGCATGCCGAAGGGCTGAGAAGCATCTATCAGCCATTCT
TAGCAATCAGAAGTATCTCCAGACCCAACTCTTGAGTAGTTGAATAATTT
TAGTGAGTAACTGTGGACTAGATTTTTATCTCTGTAAGTTCTCACAGACT
CTGAAATGAGAGTGATTCTGAAAATCATACTTTTAATAACACTAACAAAT
TTTCATGAGGAAACTGTCACTTTTCTTATTTTGTATACAGAGAAACAAAG
AAAACTTTAAAATGTTCATGTGAAACCTGCTCAGCTACAGCCAAGTCATA
TGTTGTTACTTTATAATAGTATCACCACAGGCTACAAATAAAAACCCTAG
TGATATAGTTGCAACTTTTAAAGTTGTTACCCAGGTGACATTCCATAGAC
CCTTAAAGTTTATATGCTGTTGCCAATGCACCGGTTACCTTCCAGAACTT
GAAGGTAACACCCAGTTGCTGAAGGAACCACACACATGAGTCACATATCG
TGCATATGTTAAAATGGTACTTAAGTAGATTCTTCATTCCTATTTGCTAT
CATAGCATTCATCATTCTGAAAGGTCCAATCTGTCTCGTTAAAGGAGAAA
AAGCAATTGCCAACACTGCTTATGGTTTTATTCTTTATGACACTGATCTG
TTCATGTGGCTGCTTCTACAAGCTGCAGGGATGCAN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTATCCCATTTTTAAT
AGGTTATTTGGTTCTCTGGAGCCTAACTTCTTGAGTTCTTTGTATATATT
GGGTATTAGCCCTCTATCAAATGTAGGATTGGTAAAGATCTTTTCCTAAT
CTGTTTGTTGCCTTTTTGTCTTATTGACAGTGTTGCTTGCCTTAAAGAAG
CTTTGCAATTTTATGATCTCCCATGCACATGGATTGGCAGGATTTATATA
GTTAAAATGGCTAACTTGATGAAAGCAATCTACAGATTCAGTGCAATCCC
CATCAAAATTCCAACTAAATTCTTGATTTAGATAGAGCAATTTCCAAATT
CATCTGGAATAATAAAAAACTCAGGATAGTGAAAACTATTCTCAACAAAA
GAAGAACTTCTGGTCGAATCATCATCCCTGACCTTCAGCTGTACTACAGA
ACAATTGTGATAAAAGCTGCACGGTATTGGTCCAGTGACAGGCAGGTAGA
TTAATGGAATAGAATTGAAGACCCAGAAATGAACCCTCACACCTATGGTC
ACTTGACCTTTTACAAAGGAGCTTATACCATTCAGTGGATAAAAGACAGA
ATTTTCTTCAAATGGTGCTTTGCTCACTGGGAGTTAGCATGTAAAAGAAT
GCGAATTGATCCTTTATTCTCTTCCTTGTAAAAAGTTCTGTGTTCAGTGG
G

Query= MSMg01no407_c19.b1 MSMg01no407_c19.b1 CHROMAT_FILE:
MSMg01no407_c19.b1 PHD_FILE: MSMg01no407_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:44 2005
         (652 letters)



>mm_chr2_107880333_107881384
          Length = 1052

 Score =  936 bits (484), Expect = 0.0
 Identities = 502/508 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gccgaagggctgagaagcatctatcagccattcttagcaatcagaagtatctccagaccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gccgaagggctgagaagcatctatcagccattcttagcaatcagaagtatctccagaccc 449

                                                                       
Query: 61  aactcttgagtagttgaataattttagtgagtaactgtggactagatttttatctctgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aactcttgagtagttgaataattttagtgagtaactgtggactagatttttatctctgta 389

                                                                       
Query: 121 agttctcacagactctgaaatgagagtgattctgaaaatcatacttttaataacactaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agttctcacagactctgaaatgagagtgattctgaaaatcatacttttaataacactaac 329

                                                                       
Query: 181 aaattttcatgaggaaactgtcacttttcttattttgtatacagagaaacaaagaaaact 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaattttcatgaggaaattgtcacttttcttattttgtatacagagaaacaaagaaaact 269

                                                                       
Query: 241 ttaaaatgttcatgtgaaacctgctcagctacagccaagtcatatgttgttactttataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 268 ttaaaatgttcatgtgaaacctgctcagctacagccaagtcatatgtagttactttataa 209

                                                                       
Query: 301 tagtatcaccacaggctacaaataaaaaccctagtgatatagttgcaacttttaaagttg 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tattatcaccacaggctacaaataaaaaccctagtgatatagttgcaacttttaaagttg 149

                                                                       
Query: 361 ttacccaggtgacattccatagacccttaaagtttatatgctgttgccaatgcaccggtt 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 148 ttacccaggtgacattccatagacccttaacgtttatatgctgttgccaatgcactggtt 89

                                                                       
Query: 421 accttccagaacttgaaggtaacacccagttgctgaaggaaccacacacatgagtcacat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  accttccagaacttgaaggtaacacccagttgctgaaggaaccacacacatgagtcacat 29

                                       
Query: 481 atcgtgcatatgttaaaatggtacttaa 508
           ||| ||||||||||||||||||||||||
Sbjct: 28  atcctgcatatgttaaaatggtacttaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)