CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATAGGATTCCCAATTCTACAGAAAAAATATTCTCCATAAATAAAA
GCTACACAAAGACAAATTCAAACAGAAAAAAACTAAATTTATCTCCTATG
GATGCCAATTACACAAGATTTAAAAATAATCTAAAACTGAAATAGCAGCA
GGGTAATTTTTGGAATTACACTGAGAAATGGAAACATGAGAATAAGTAAA
TATGATGGGAAACAATGAAGAACTAAAACATTTCTTTATCAGTGATTTTC
CCTCTGTCCATGTACTTACAAAAGTATATTAGCTTATAGATTTTTTTCTT
TCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCA
AAAGTCCCCCATACCCCCCCACCCCCACTCCCCTACCCGCCCACTCCCCC
TTTTTGGCCCTGGCGTTCCCCTGTTCTGGGGCATATAAAGTTTGCATGTC
CAATGTGCCTCTCTTTTCAGTGATGGCCGATTAGGACCTCTTTTGATATA
TATGTCGCTAAAGAACAGAGCTCCGGTGTACTGGTTAGTTCATAATGGTG
TCCCCCCTACCGGGTTGTTGAATCCTTCAACTTCACTTGGGAGATTTTCT
TAGCCTCCTAGGGGTAGTGCTTGGTATAAACCTATCACTTAATTGGGTTT
ATTCTTTCTTCTTTTTTGCATAATATTACGCTTTCTCTTTTTTCTGCATG
TGCCATCTTCGCATGGTCCCATCATATTTCATTTGGTCT

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGAACTCTTCAGCTGGGGAACGGT
GGTAATGAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATTCAACTGCG
TGAATTCAGAACTCTTCAGCTGGGGAATGGTGGTAATGAAGTGTTCCCAC
AACACAGACTGTTGAGAAGGATTCAACTGCGTGAATTCAGAACTCTTCAG
CTGGGGAACAGGGTACCCGTAAGTATAGCTTTACAAGGTAAGTCTGGTCT
TGAACTTTCTAACGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAAAA
TAGCTTTACAAGGTAAGTCTGGCCTTGAACTTTCTAACGAAATTCAAGAC
AGTCTATCAGAAGTATAGTGGCAAATAGCTTTACTAGGTATGTTTGGCCC
TGAACTTTTTCTAGCGTTAGGAGCCTTTTTGTTCCTTTTCCCATGTTATC
CAGCGCTCTTGGCCTGGCTTATTTTTCTGGATGATATTCTGGTCTCTTTC
TCTATAATCTTTTGCCTTTCTTATATTCTATTCTCCCTTTCTTTTTCATT
ACCTTCTATTTTCCAACTCCTTTTTTCATTTTCCCACCCCCTCTTTTACA
CTTATTTTTCCCTTCTCTCTTCTTCTTCTTTTGACCCACATTTATTTTTT
ATTTCCTTCTCTTCTTTTATCCCTTTTAACATATTTATCCTTTAACTATT
TACATTTTTCTTTTCCTTCCTCTTTCTTTTCTTTTCCATTN

Query= MSMg01no409_d08.b1 MSMg01no409_d08.b1 CHROMAT_FILE:
MSMg01no409_d08.b1 PHD_FILE: MSMg01no409_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:29 2005
         (444 letters)



>mm_chr2_7926103_7926947
          Length = 845

 Score =  777 bits (402), Expect = 0.0
 Identities = 432/442 (97%), Gaps = 1/442 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctataggattcccaattctacagaaaaaatattctccataaataaaagctacac 63
           ||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 204 ggaattctataggatacagaattctacagaaaaactattctccataaataaaagctacac 263

                                                                       
Query: 64  aaagacaaattcaaacagaaaaaaa-ctaaatttatctcctatggatgccaattacacaa 122
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 aaagacaaattcaaacagaaaaaaaactaaatttatctcctatggatgccaattacacaa 323

                                                                       
Query: 123 gatttaaaaataatctaaaactgaaatagcagcagggtaatttttggaattacactgaga 182
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatttgaaaataatctaaaactgaaatagcagcagggtaatttttggaattacactgaga 383

                                                                       
Query: 183 aatggaaacatgagaataagtaaatatgatgggaaacaatgaagaactaaaacatttctt 242
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 384 aatggaaacatgagaataagtaaatatgatgagaaacaatgaagaactaaaacatttctt 443

                                                                       
Query: 243 tatcagtgattttccctctgtccatgtacttacaaaagtatattagcttatagatttttt 302
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatcagtgattttccctctgtccgtgtacttacaaaagtatattagcttatagatttttt 503

                                                                       
Query: 303 tctttccattttttattaggtatttagctcatttacatttccaatgctataccaaaagtc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctttccattttttattaggtatttagctcatttacatttccaatgctataccaaaagtc 563

                                                                       
Query: 363 ccccatacccccccacccccactcccctacccgcccactccccctttttggccctggcgt 422
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccccatacccacccacccccactcccctacccgcccactccccctttttggccctggcgt 623

                                 
Query: 423 tcccctgttctggggcatataa 444
           ||| ||||||||||||||||||
Sbjct: 624 tccactgttctggggcatataa 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space:   362390
Effective search space used:   362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)