Query= MSMg01no410_h18.b1 MSMg01no410_h18.b1 CHROMAT_FILE:
MSMg01no410_h18.b1 PHD_FILE: MSMg01no410_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:14 2005
(269 letters)
>mm_chr2_163589591_163590260
Length = 670
Score = 491 bits (254), Expect = e-143
Identities = 264/268 (98%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1 attccctgttcttcc--gtgtccttctgggatctggccaagcgctgatgagtggcactga 58
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 attccctgttc-tccaggtgtccttctgggatctggccaagcgctgatgagtggcactga 409
Query: 59 ctcagcaagaataaagccattgctgcctggcttgatggctcttctcacagtgggcttcag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctcagcaagaataaagccattgctgcctggcttgatggctcttctcacagtgggcttcag 349
Query: 119 ggataagtcgcccaagtgctgggcacctcttagacccttccagacccgtgctccctgcaa 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggataagtcgcccaagtgctgggcacctcttagacccttccagacccgtgctccctgcag 289
Query: 179 tcaccctaaatgctagcaagaagactcttccctgtgtcacgcatgtaaggaaccagctgg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcaccctaaatgctagcaagaagactcttccctgtgtcacgcatgtaaggaaccagctgg 229
Query: 239 ggcacgggatggaggaggctctcctgtg 266
||||||||||||||||||||||||||||
Sbjct: 228 ggcacgggatggaggaggctctcctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 670
Length adjustment: 9
Effective length of query: 260
Effective length of database: 661
Effective search space: 171860
Effective search space used: 171860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_h18.g1 MSMg01no410_h18.g1 CHROMAT_FILE:
MSMg01no410_h18.g1 PHD_FILE: MSMg01no410_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:14 2005
(418 letters)
>mm_chr2_163405691_163406508
Length = 818
Score = 777 bits (402), Expect = 0.0
Identities = 414/418 (99%)
Strand = Plus / Plus
Query: 1 tggaatgagtgattgtcactgtactccaggcactgaggcctcaccagcacactcaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tggaatgagtgattgtcactgtactccaggcactgaggcctcaccagcacactcaggctg 260
Query: 61 aggctatgagaacgtggtatttttagagaagtgggggccataaaacttgtacagtcccca 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 aggctatgagaacgtggtatttttagagaagtgggagccataaaacttgtacagtcccca 320
Query: 121 aggcccagcccttcctcctaagctctgagattgtgcccggccttgggaagggctcctcag 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgcccagcccttcctcctaagctctgagattgtgcccggccttgggaagggctcctcag 380
Query: 181 ccttatcttgggaagagtgaaactgtaaaactctttatggctttgagatcatgtctggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttatcttgggaagagtgaaactgtaaaactctttatggctttgagatcatgtctggca 440
Query: 241 ggagcagcgattgttgccataaacccaagctggccctgctaggagggcgatgccctgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagcagcgattgttgccataaacccaagctggccctgctaggagggcgatgccctgggt 500
Query: 301 tgcaaggagtcaggggagagttgagcaatgccaagggagtggctgccactgagccgagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcaaggagtcaggggagagttgagcaatgccaagggagtggctgccactgagccgagct 560
Query: 361 cttctggggcctgtgaactagagttcgtcacagatttagcccacgctgcccctggctg 418
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 cttctggggcctgtgaactagagtccgtcacagatttagcccacgctgcccctggctg 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
