Query= MSMg01no411_c04.b1 MSMg01no411_c04.b1 CHROMAT_FILE:
MSMg01no411_c04.b1 PHD_FILE: MSMg01no411_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:05 2005
(584 letters)
>mm_chr2_77368924_77369907
Length = 984
Score = 1083 bits (560), Expect = 0.0
Identities = 575/580 (99%)
Strand = Plus / Minus
Query: 5 gaattctagcatttagcaagttgtaaacagatctaaccaaacagagtgttagccactgtg 64
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gaattttagaatttagcaagttgtaaacagatctaaccaaacagagtgttagccactgtg 725
Query: 65 ccatctcaccagccctagaaatatgttttcttttaacaggatatacatttagtgatttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ccatctcaccagccctagaaatatgttttcttttaacaggatatacatttagtgatttct 665
Query: 125 ttctgtaaaaggaaactaagcacaagtaagtttgagtttccccatgagtatggagtatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 664 ttctgtaaaaggaaactaagcacaagtaagtttgagtttccccatgagtatagagtatcc 605
Query: 185 agtgggcagcaccatagagacctggctatgctcttgggagcagagtcagctcagaattca 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 604 agtgggcagcaccatagagacctgcctatgctcttgggagcagagtcagctcagaattca 545
Query: 245 agagtcagtagttctttttatatttttattatgcgttgtttgtgtgtgacatgggggtta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agagtcagtagttctttttatatttttattatgcgttgtttgtgtgtgacatgggggtta 485
Query: 305 ggggacatgcattgccatagcctactcatagagacgaggacaaatgtaaaaagtcagctc 364
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 484 ggggacatgcattgccatagcctactcatagagacgaggacaaatgtataaagtcagctc 425
Query: 365 tctcttagccgtttttatgtggcctcagggacctgattcaggtcccaggctcacagagca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tctcttagccgtttttatgtggcctcagggacctgattcaggtcccaggctcacagagca 365
Query: 425 agcaccttcacgtccttagctgtctcacggtggatgatcagtagttcccaaggagggctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agcaccttcacgtccttagctgtctcacggtggatgatcagtagttcccaaggagggctc 305
Query: 485 tcatcagagcacagccagcagtggggagacttgatcagcagcatccatacgcagaggccg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tcatcagagcacagccagcagtggggagacttgatcagcagcatccatacgcagaggccg 245
Query: 545 gaggaggaaggtctgcgacatcagtgaggccagggaagga 584
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaggaggaaggtctgcgacatcagtgaggccagggaagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_c04.g1 MSMg01no411_c04.g1 CHROMAT_FILE:
MSMg01no411_c04.g1 PHD_FILE: MSMg01no411_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:05 2005
(523 letters)
>mm_chr2_77172623_77173546
Length = 924
Score = 975 bits (504), Expect = 0.0
Identities = 519/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Plus
Query: 1 cttcatttgtatccagaagggcgtctaccacacaccctcttcagtgagcaggataaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcatttgtatccagaagggcgtctaccacacaccctcttcagtgagcaggataaacat 260
Query: 61 ctatcctgttctaagcagatctccccgctcagagtctgtacatctggaaaacgttgctg- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatcctgttctaagcagatctccccgctcagagtctgtacatctggaaaacgttgctgc 320
Query: 120 tctaaagcatggttccaactgtgagccgctggcaggagctcccgctactcagacttttgg 179
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaagcgtggttccaactgtgagccgctggcaggagctcccgctactcagacttttgg 380
Query: 180 tatttattgggagatcctgcataaatggcacaaggatgcctggagggaggcctggaaaac 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tatttattgggagatcctgcataaatggcacaaggatgcccggagggaggcctggaaaac 440
Query: 240 cctccggagctccacagctgggctccctctctcagctgccaggctggcatcgtgtttggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctccggagctccacagctgggctccctctctcagctgccaggctggcatcgtgtttggg 500
Query: 300 cagtgagctttagattctgacagagatgaaaggctaaggaccaaacctctgttacggaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtgagctttagattctgacagagatgaaaggctaaggaccaaacctctgttacggaaa 560
Query: 360 gacttccagattcttcttccagtctccagcttccttgttgatgagaattcatgaattggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacttccagattcttcttccagtctccagcttccttgttgatgagaattcatgaattggt 620
Query: 420 tatatcttcaaaactttcaaagtgagttcagatcaatattgttgagccttaagtatggcg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatatcttcaaaactttcaaagtgagttcagatcaatattgttgagccttaagtatggcg 680
Query: 480 agttacatttataagcattgtcctgaggactcggtaagaacgtt 523
||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 681 agttacatttaaaagcattgtcctgaggactcggcaagaacgtt 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space: 468882
Effective search space used: 468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
