NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTTTCTTCATAGCAGTCAAAGCAAAACCCAATGTCTTCTTG
CCCAGAAATACAAAGGCCGTATAAGATGGAGACAGTGACAGAGTGGCACG
AGGCTACCTTTTAATACAAGAGAGTCTCTGACTAATGTCCACAAAAATCT
CTTGACAATAAGAAGGAATAACAAACATATTTGTCTAACTTCTTTTTAAA
AACCAATTACAAGTTTCACTTTCAGAGAATAATATTTCTTTCCCAAGTTC
ACTTCATCTAAAAATAATCAGCACTAGAGATATCTTTTGTAAGTGACGTT
GTTAATTTACATTTAAGAACTATTTTACAAGTTCCACCTGGTTTCTGTCA
AAAAGACTGCAATGACATCTGTTAGACACTGTCAGTAGTTCCTGAAAATT
CAAAGAAACTAAAGCTTCCCCACTCTATTTGCAATCACTAAATGATTAAT
TGGGATTTCTTTCCCATTGAATACATGTACTGTCAGGTTAAACAGATATT
TACTAATCTAATATAATAAAGATTTTTTGGTTTATTATTTTTCTTTTTTC
CTTTTTTAATTAATATTAATCACTCCATTCATTTACATCTCCAATGAAAT
CCACTTTCCTGTTTACACCTTAATAAATTTTCCATCTCACATTTGGCCCT
TTCCCCTCCCTTTTGGCACCCACCCACCCTTTTTCCACCCTTTTGTCTCA
GAATCCCCTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTGGCCACTGAAGGGGTTCCATAGATCCTCTAAGCATCATGGG
CTATTGCCAAGGCAATTGGTTACCCTCCATAAAAGACAGAAAGTGCATAC
CTCTGAAGATACCCCTTACCTATGTCCTGGAGAAAGTTATGTAATGGGTG
GTGCACAAGTAGAAGCCTCAAATTACTGCCTACTACTGATAACGGTGCTG
AAGGAGAACAGTGACCATCAATTTCCCCTTGCACAAAGCCTGTGACCTAC
AACAGTGAACTGCCTGTAAAATATGCTGCTTCCATAGTGACATAAATATT
ATGGGAGTAACCAACCACTGTTTGCTTGAAGCCCACTTAAGGCTCACTCC
ATGAGATGTTGCCCAGATGTTACACTGCCTAAGTGGCCAAGAACATGAGA
CTGGATAGTCATGGGCCTACGGGAAAACGTATTACTATTATTTTCATAAA
GGAACATAGAAATAAAATGACTCCTAATGACGTATTTCTATATCCACAGA
TCAGAGGATTACTCAACTTTCACCATAGAAGCTTCTTTTTTACAGTANAC
GGGAATTAACATAAAGAGTCACAACTGGACAATGTACAGAGAGGGAGATA
CTTTGGAGCCTTCTTCCCTAAGGGGAAGGCTTTATCAAATCCCTCAGCCC
CAAAATTTGACCAATGTGGAGTGGAAAAATTTTCAATTCTCCN

Query= MSMg01no411_f17.b1 MSMg01no411_f17.b1 CHROMAT_FILE:
MSMg01no411_f17.b1 PHD_FILE: MSMg01no411_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:22 2005
         (485 letters)



>mm_chr2_43146631_43147516
          Length = 886

 Score =  853 bits (441), Expect = 0.0
 Identities = 471/481 (97%), Gaps = 1/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctttc-ttcatagcagtcaaagcaaaacccaatgtcttcttgcccagaaataca 63
           |||||||||||  | |||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 205 gaattcctttcaataatagcagtcaaagcaaaatccaatgtcttcttgcccataaataca 264

                                                                       
Query: 64  aaggccgtataagatggagacagtgacagagtggcacgaggctaccttttaatacaagag 123
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggccatataagatggagacagtgacagagtggcacgaggctaccttttaatacaagag 324

                                                                       
Query: 124 agtctctgactaatgtccacaaaaatctcttgacaataagaaggaataacaaacatattt 183
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtttctgactaatgtccacaaaaatctcttgacaataagaaggaataacaaacatattt 384

                                                                       
Query: 184 gtctaacttctttttaaaaaccaattacaagtttcactttcagagaataatatttctttc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctaacttctttttaaaaaccaattacaagtttcactttcagagaataatatttctttc 444

                                                                       
Query: 244 ccaagttcacttcatctaaaaataatcagcactagagatatcttttgtaagtgacgttgt 303
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 ccaagttcacttcatctaaaaataatcagcactagagatattttttgtaagtgacgttgt 504

                                                                       
Query: 304 taatttacatttaagaactattttacaagttccacctggtttctgtcaaaaagactgcaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 taatttacatttaagaactattttacaagttccacctggtttctgtcaaaaaggctgcaa 564

                                                                       
Query: 364 tgacatctgttagacactgtcagtagttcctgaaaattcaaagaaactaaagcttcccca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgacatctgttagacactgtcagtagttcctgaaaattcaaagaaactaaagcttcccca 624

                                                                       
Query: 424 ctctatttgcaatcactaaatgattaattgggatttctttcccattgaatacatgtactg 483
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctccatttgcaatcactaaatgattaattgggatttctttcccattgaatacatgtactg 684

            
Query: 484 t 484
           |
Sbjct: 685 t 685


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 886
Length adjustment: 10
Effective length of query: 475
Effective length of database: 876
Effective search space:   416100
Effective search space used:   416100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)