Query= MSMg01no412_c21.b1 MSMg01no412_c21.b1 CHROMAT_FILE:
MSMg01no412_c21.b1 PHD_FILE: MSMg01no412_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:27 2005
(486 letters)
>mm_chr2_120399007_120399892
Length = 886
Score = 926 bits (479), Expect = 0.0
Identities = 482/483 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaatgcaggatctctggaagtgcagacagtgctcttaacctctgagccacctct 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatgcaggacctctggaagtgcagacagtgctcttaacctctgagccacctct 263
Query: 64 ccagcccctgatttatttcttgaattcatttcttaccatttctctttggattctagaagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccagcccctgatttatttcttgaattcatttcttaccatttctctttggattctagaagt 323
Query: 124 taaacaatgggtagctatgttgaacatatacttgtacatttagagcagaggttctcaacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaacaatgggtagctatgttgaacatatacttgtacatttagagcagaggttctcaacc 383
Query: 184 ttaatgctgtgaccctttcatacagttccttatgttgtgatgacctccaaccataaaatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaatgctgtgaccctttcatacagttccttatgttgtgatgacctccaaccataaaatt 443
Query: 244 atttcattgctacttcataactgtaactttgttactgttatgaattataatgtaaatatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttcattgctacttcataactgtaactttgttactgttatgaattataatgtaaatatc 503
Query: 304 tgatatgcaggatatcacacatgcaacccccaaggggtctcaacccattaagttgaaaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgatatgcaggatatcacacatgcaacccccaaggggtctcaacccattaagttgaaaac 563
Query: 364 cactgctctagagcttagaatgaaggcactcatggcattgaatgtctcatatgattaaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cactgctctagagcttagaatgaaggcactcatggcattgaatgtctcatatgattaaag 623
Query: 424 atgattgacaaggcttcatcttacctaaactgtatatacccaaactatccaaggtcttag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgattgacaaggcttcatcttacctaaactgtatatacccaaactatccaaggtcttag 683
Query: 484 ctg 486
|||
Sbjct: 684 ctg 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_c21.g1 MSMg01no412_c21.g1 CHROMAT_FILE:
MSMg01no412_c21.g1 PHD_FILE: MSMg01no412_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:28 2005
(399 letters)
>mm_chr2_120585720_120586518
Length = 799
Score = 669 bits (346), Expect = 0.0
Identities = 352/354 (99%), Gaps = 2/354 (0%)
Strand = Plus / Minus
Query: 47 tggcgcacgccttttaatcccagcacttgggaggcagaggcaggaggatttctgagttcg 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tggcgcacgccttttaatcccagcacttgggaggcagaggcaggaggatttctgagttcg 740
Query: 107 aggccagcctgatctacagagtaagttccagaacagccagggttatacagagaaacctgt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aggccagcctgatctacagagtaagttccagaacagccagggttatacagagaaacctgt 680
Query: 167 ctntggggag-aaaaaaaaaagaagaagaagaggaggaagagaaggaggaggagaagaag 225
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ct-tggggagaaaaaaaaaaagaagaagaagaggaggaagagaaggaggaggagaagaag 621
Query: 226 aagaagaagaaaagaagaagatgtcctctttataaatatataaatggccaaataagtggt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagaagaagaaaagaagaagatgtcctctttataaatatataaatggccaaataagtggt 561
Query: 286 ttacgtgaatagatatgagcatatagacacacacacatatgcatgtatgtgtatatatat 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttacgtgaatagatatgagcatatagacacacacacatatgcatgtatgtgtatatatat 501
Query: 346 gatgttttcttctttgagccatggattctgaaggaaccgtcattataaatcttt 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatgttttcttctttgagccatggattctgaaggaaccgtcattataaatcttt 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
