Query= MSMg01no413_a04.b1 MSMg01no413_a04.b1 CHROMAT_FILE:
MSMg01no413_a04.b1 PHD_FILE: MSMg01no413_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:34 2005
(506 letters)
>mm_chr2_84877244_84878148
Length = 905
Score = 932 bits (482), Expect = 0.0
Identities = 497/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Minus
Query: 5 gaattcgggaaggatactcgataagcaagaaacaacgccaccttactccgctcagccatg 64
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gaattcgggaaggagact-gataagcaagaaacaacgccaccttactccgctcagccatg 647
Query: 65 tacctggtatgtctcaagttctttgctgcctggggatcttactgacccgttctgcagggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tacctggtatgtctcaagttctttgctgcctggggatcttactgacccgttctgcagggc 587
Query: 125 tcctgaggccaaggcccaggaccctaggtgcagaaccaggcctatagtggcgcttacacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tcctgaggccaaggcccaggaccctaggtgcagaaccaggcctatagtggcgcttacacc 527
Query: 185 ccaacccgacaccctctcggtacgttccaccgacaggcacggcaacaatcggcggaacct 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 526 ccaacccgacaccctctcggtacgttccacggacaggcacggcaacaatcggcggaacct 467
Query: 245 gagacccgctcagagagcgcacctcaactccgctcatagggtagtgtcctgatcgcagag 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 466 gagacccgctcagagagcgcacctcaactccgctcagagggtagtgtcctgatcgcagag 407
Query: 305 accccaccaccccggggccccgcgtgaatctacgtttctcccccttcttttaaaatggat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 accccaccaccccggggccccgcgtgaatctacgtttctcccccttcttttaaaatggat 347
Query: 365 tcgcccattgcccgcgaatttgaacgcggatcgatccattccgatcgtcccgcgggggag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcgcccattgcccgcgaatttgaacgcggatcgatccattccgatcgtcccgcgggggag 287
Query: 425 cggggcccatgcacaccaggggcccagggatcgcgaccacccacctctaagagctgcagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cggggcccatgcacaccaggggcccagggatcgcgaccacccacctctaagagctgcagc 227
Query: 485 ctcgcgacggcatagtgagggc 506
|||||||||||| |||||||||
Sbjct: 226 ctcgcgacggcacagtgagggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_a04.g1 MSMg01no413_a04.g1 CHROMAT_FILE:
MSMg01no413_a04.g1 PHD_FILE: MSMg01no413_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:34 2005
(251 letters)
>mm_chr2_84757478_84758128
Length = 651
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 tcttgattcacactggggtgggtgctaccatgaccctcaacttaggtaatgtgtccctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgattcacactggggtgggtgctaccatgaccctcaacttaggtaatgtgtccctgg 260
Query: 61 catatacactgcagacccatggttcaaacatggacagtttggctcccagcaccatgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catatacactgcagacccatggttcaaacatggacagtttggctcccagcaccatgttgt 320
Query: 121 ccatcttcaagactccaccatagggggctagggtgataatgtggatgcacaggctcctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatcttcaagactccaccatagggggctagggtgataatgtggatgcacaggctcctga 380
Query: 181 caaagcagcaggactaatatggtgggcagttgttccctcctcctcctcctcctcctcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagcagcaggactaatatggtgggcagttgttccctcctcctcctcctcctcctcctc 440
Query: 241 ctcctcct 248
||||||||
Sbjct: 441 ctcctcct 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
