Query= MSMg01no413_p19.b1 MSMg01no413_p19.b1 CHROMAT_FILE:
MSMg01no413_p19.b1 PHD_FILE: MSMg01no413_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:51 2005
(640 letters)
>mm_chr2_46086598_46087639
Length = 1042
Score = 1185 bits (613), Expect = 0.0
Identities = 631/637 (99%), Gaps = 2/637 (0%)
Strand = Plus / Plus
Query: 6 gaattcttgagaaattatcactcattggaatctctccctgaatttcagtaccagaagcac 65
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttgagaaatcatgactcattggaatctctccctgaatttcagtaccagaagcac 265
Query: 66 ttctaggaagccccagcaatgtgttattt-gatgatactctttaggcaaatttacatttt 124
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 266 ttctaggaagccccagcaatgtgtttttttgatgatactctttaggcaaatttacatttt 325
Query: 125 caaagcagtaactttatgacagtcattgggaagctacagtgtgaaatcatgcccactgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caaagcagtaactttatgacagtcattgggaagctacagtgtgaaatcatgcccactgca 385
Query: 185 taccttggtgtaactatgggaattaagtgtgatttttttttt-acattttaagtgatttt 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 386 taccttggtgtaactatgggaattaagtgtgatttttttttttacattttaagtgatttt 445
Query: 244 taaaatgtctaactaataataatttcttaaatggaaatcatattccagtatcaaaaatat 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 446 taaaatgtctaactaataataatttcttaaatggaaatcaaattccagtatcaaaaatat 505
Query: 304 agtttaattagaatacagatctgaccttcatttattgtttcaggtactttttcataaaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agtttaattagaatacagatctgaccttcatttattgtttcaggtactttttcataaaac 565
Query: 364 tcattgctcacagtcattatcacattatggactgttatcacaaaatatttaactaatctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tcattgctcacagtcattatcacattatggactgttatcacaaaatatttaactaatctc 625
Query: 424 cagtccacagaaaataatggccctgcaattgtgagctgtggcgttttagagtcaatatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagtccacagaaaataatggccctgcaattgtgagctgtggcgttttagagtcaatatat 685
Query: 484 gaaaaatattaaccttttatacttttttatgatatcttcctattcacaatttttgtcctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaaaaatattaaccttttatacttttttatgatatcttcctattcacaatttttgtcctc 745
Query: 544 tttgttcagttttttaggatcatttctccccagccagatgccttctagtcaccagcggat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tttgttcagttttttaggatcatttctccccagccagatgccttctagtcaccagcggat 805
Query: 604 gcttcatggagttgcttcagtgcaaggagccagccgt 640
|||||||||||||||||||||||||||||||||||||
Sbjct: 806 gcttcatggagttgcttcagtgcaaggagccagccgt 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1042
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1032
Effective search space: 650160
Effective search space used: 650160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_p19.g1 MSMg01no413_p19.g1 CHROMAT_FILE:
MSMg01no413_p19.g1 PHD_FILE: MSMg01no413_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:51 2005
(519 letters)
>mm_chr2_46282098_46283016
Length = 919
Score = 988 bits (511), Expect = 0.0
Identities = 517/519 (99%)
Strand = Plus / Minus
Query: 1 tatctgaattactaagattaaggagccaatgtaggcactggatttgcctgatttcaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tatctgaattactaagattaaggagccaatgtaggcactggatttgcctgatttcaccta 660
Query: 61 actaccattttccaagccttgtttgaaatcatgttaaatcttaacactcagtactggcta 120
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 659 actatcattttccaagccttgtttgaaatcatgttaaatcttaaaactcagtactggcta 600
Query: 121 cagatctcggtttgttccttgtcgtggatgctctctagttctgatctctctttggttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cagatctcggtttgttccttgtcgtggatgctctctagttctgatctctctttggttaca 540
Query: 181 gacagctttgttactggtttccttatttgtgaatggaaagatcagtgtacctgacagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gacagctttgttactggtttccttatttgtgaatggaaagatcagtgtacctgacagagg 480
Query: 241 cagtgttttatctaaagggctgggttaagctcttctatttcaatacccgtaattgatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cagtgttttatctaaagggctgggttaagctcttctatttcaatacccgtaattgatgaa 420
Query: 301 gattttcaaatgtattcctttcaccatatgatggaatcattagtaaatatgatttgagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gattttcaaatgtattcctttcaccatatgatggaatcattagtaaatatgatttgagca 360
Query: 361 ctgctgtgaaaagttaggctaaattgcctatcacagtgcagcagtctgaagaaaacctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctgctgtgaaaagttaggctaaattgcctatcacagtgcagcagtctgaagaaaacctcc 300
Query: 421 atgaggaaagctttttaaaacttacttactggggtgacatgagctagcaaggctgttatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atgaggaaagctttttaaaacttacttactggggtgacatgagctagcaaggctgttatc 240
Query: 481 acctgataatgcacttctaggtgagctaaattttccaaa 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 acctgataatgcacttctaggtgagctaaattttccaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
