Query= MSMg01no415_b05.b1 MSMg01no415_b05.b1 CHROMAT_FILE:
MSMg01no415_b05.b1 PHD_FILE: MSMg01no415_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:20 2005
(418 letters)
>mm_chr2_101286299_101287116
Length = 818
Score = 785 bits (406), Expect = 0.0
Identities = 412/414 (99%)
Strand = Plus / Plus
Query: 5 gaattctctcatatggcaaagggtgattagatgctaggaaggaaattaacatgtatatga 64
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcataaggcaaagagtgattagatgctaggaaggaaattaacatgtatatga 264
Query: 65 taacagacctgactcagtaatataagaaacccctactacaccatttccctagcagcatct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taacagacctgactcagtaatataagaaacccctactacaccatttccctagcagcatct 324
Query: 125 cacatattttaggaacttgcctaaccatcctgattatcccatgacaggtcacatctgtgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacatattttaggaacttgcctaaccatcctgattatcccatgacaggtcacatctgtgc 384
Query: 185 aagccatccagctgaggaacaagtaggaacatctcctgaagtttgtattcacaaagcaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagccatccagctgaggaacaagtaggaacatctcctgaagtttgtattcacaaagcaaa 444
Query: 245 ttactgcgtactgccatttttagttgacagcttaagaataattaactggctggagacaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttactgcgtactgccatttttagttgacagcttaagaataattaactggctggagacaag 504
Query: 305 aaggagagaagagggtgagaactctctgcttcttaaaggttctctgtgtgatgcagagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaggagagaagagggtgagaactctctgcttcttaaaggttctctgtgtgatgcagagaa 564
Query: 365 gggtgctggtttctgtggcaggttggaaacagttgtctctgaagttgaaatgac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggtgctggtttctgtggcaggttggaaacagttgtctctgaagttgaaatgac 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_b05.g1 MSMg01no415_b05.g1 CHROMAT_FILE:
MSMg01no415_b05.g1 PHD_FILE: MSMg01no415_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:20 2005
(402 letters)
>mm_chr2_101486075_101486873
Length = 799
Score = 721 bits (373), Expect = 0.0
Identities = 392/400 (98%), Gaps = 3/400 (0%)
Strand = Plus / Minus
Query: 1 aaaagaaatgttgctagcagaatccaccaggactattctttagctccttcacgatttccc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 597 aaaagaaatgttgctagcagaat---ccaggactattctttagctccttcacgatttccc 541
Query: 61 tgatgcccaaagtcccactcctggtcaaaatgtgttcatctggggcatcgtgttcctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgatgcccaaagtcccactcctggtcaaaatgtgttcatctggggcatcgtgttcctgac 481
Query: 121 tacatggctagaaagctcattgagttggttaatctgttgaggggaaaatgagcttctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tacatggctagaaagctcattgagttggttaatctgttgaggggaaaatgagcttctaga 421
Query: 181 cataagttgtaggtcaaaagagttaacgtaatcacagctgggaagcatgggtgagctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cataagttgtaggtcaaaagagttaacgtaatcacagctgggaagcatgggtgagctaga 361
Query: 241 gaactataggacgtgtggtctaattccagaggactcagaggacactgcttactctcctct 300
||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaactgtaggacatgtgatctaattccagaggactcagaggacactgcttactctcctct 301
Query: 301 acacagtgtttgatatttatattgtaattggcatattttatttagngttttttactacta 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 300 acacagtgtttgatatttatattgtaattggcatattttatttagtgttttttactacta 241
Query: 361 ctattttttggtgttgttttagatttatttattttctgta 400
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 240 ctattttttgttgttgttttagatttatttattttctgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 799
Length adjustment: 9
Effective length of query: 393
Effective length of database: 790
Effective search space: 310470
Effective search space used: 310470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
