Query= MSMg01no415_k07.b1 MSMg01no415_k07.b1 CHROMAT_FILE:
MSMg01no415_k07.b1 PHD_FILE: MSMg01no415_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:05 2005
(248 letters)
>mm_chr2_102479292_102479939
Length = 648
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 tagggggatcgatcgatgggagaaaatccccttgctcaattaagctttctataaaagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tagggggatcgatcgatgggagaaaatccccttgctcaattaagctttctataaaagcct 388
Query: 61 tccacaatattaacagcagttcacaagtgaccgtggaaaaggaaagaggctcaaactcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tccacaatattaacagcagttcacaagtgaccgtggaaaaggaaagaggctcaaactcaa 328
Query: 121 agatgagccttgactcacttgggatacaggacggggcccgcccactccacttcccagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agatgagccttgactcacttgggatacaggacggggcccgcccactccacttcccagttc 268
Query: 181 tcatgcatgtcctcctgctgcttcccaggcggcggtagaagggcgagatgcactcatact 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcaggcatgtcctcctgctgcttcccaggcggcggtagaagggcgagatgcactcatact 208
Query: 241 ggacttg 247
|||||||
Sbjct: 207 ggacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_k07.g1 MSMg01no415_k07.g1 CHROMAT_FILE:
MSMg01no415_k07.g1 PHD_FILE: MSMg01no415_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:05 2005
(446 letters)
>mm_chr2_102314904_102315749
Length = 846
Score = 789 bits (408), Expect = 0.0
Identities = 438/454 (96%), Gaps = 10/454 (2%)
Strand = Plus / Plus
Query: 1 attccatagcagctcttattttgtagcattcataaagaacattcatccttcccatgtagc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 attccatagcagctcttactttgtagcattcataaagaacattcatccttcccatgtagc 250
Query: 61 tttgggattcactcagccatcagaaaacattgtgctctgcagactgaagtaaaggatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttgggattcactcagccatcagaaaacattgtgctctgcagactgaagtaaaggatgga 310
Query: 121 ctttggtcttctgtgtttgcaaattcctcactttgaaacttttggaagtttttt------ 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctttggtcttctgtgtttgcaaattcctcactttgaaacttttggaagttttttccttca 370
Query: 175 ----tcttcacctccatttcttctctaaaaatgagcagatgatactcattgcatgacacc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cttttcttcacctccatttcttctctaaaaatgagcagatgatactcattgcatgacacc 430
Query: 231 tcagagaattgtgtcttattcatttcaatttctatacctatcaggttgcagacacatatt 290
||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 431 tcagagaattgtgtcatatacatttcaatgtctatacctatcaggttgcagacacatatt 490
Query: 291 gtgatggccatatggcatcaagaactgactaaggggaactgtgatttaaacccttacaca 350
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 491 gtgatggccatatggcatcaagaactgactaaggggaattgtgatttaaacccttacaca 550
Query: 351 ggtttgtgcagtagctaggccaaccaaaaatagctaggcaggaagagatgggatcaaagc 410
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggtttgtgcagtagctaggacaaccaaaaatagctaggcaggaagagatgggatcaaagc 610
Query: 411 tatgtgttttgaaggatgtgtttttcttcatgtg 444
||||||||||||||||||||||||||||||||||
Sbjct: 611 tatgtgttttgaaggatgtgtttttcttcatgtg 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
