Query= MSMg01no416_g11.b1 MSMg01no416_g11.b1 CHROMAT_FILE:
MSMg01no416_g11.b1 PHD_FILE: MSMg01no416_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:01 2005
(248 letters)
>mm_chr2_173157645_173158292
Length = 648
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 1 gaatatacaaaggtgctgttgatgcactgtcttatgtgtcacaccgaagtgcagctgtgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 448 gaatatacaaaggtgctgttgatgcactttcttatgtgtcacaccgaagtgcagctgtgt 389
Query: 61 gcaaagcttccactggagacacaaagcagagggctcatagttcacaccatgttggggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gcaaagcttccactggagacacaaagcagagggctcatagttcacaccatgtt-gggggg 330
Query: 121 gacacaaggcaaagggctcacagttcacaccatgttgggggggacacaaggcaagtggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gacacaaggcaaagggctcacagttcacaccatgttgggggggacacaaggcaagtggcc 270
Query: 181 cacagttcacaccatgtt-ggggggggacacaaggcaaagggctcagagttcacaccatg 239
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cacggttcacaccatgttgggggggggacacaaggcaaagggctcagagttcacaccatg 210
Query: 240 ttgagggga 248
|||||||||
Sbjct: 209 ttgagggga 201
Score = 205 bits (106), Expect = 2e-57
Identities = 156/174 (89%), Gaps = 9/174 (5%)
Strand = Plus / Minus
Query: 78 gacacaaagcagagggctcatagttcacaccatgttggggggggacacaaggcaaagggc 137
||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||||||||
Sbjct: 243 gacacaaggcaaagggctcagagttcacaccatgtt--gaggggacacaaggcaaagggc 186
Query: 138 tcacagttcacaccatgtt-gggggggacacaaggc-aagtggcccacagttcacaccat 195
||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 185 tcacagttcacaccatgttggggggggacacaaggcaaag-ggctcacagttcacaccat 127
Query: 196 gttggggggggacacaaggcaaagggctcagagttcacacc-atgttgagggga 248
||| | |||||||||||||||||| |||| |||||||||| | |||||||||
Sbjct: 126 gtt--gaggggacacaaggcaaaggactcacagttcacacccac-ttgagggga 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 3
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no416_g11.g1 MSMg01no416_g11.g1 CHROMAT_FILE:
MSMg01no416_g11.g1 PHD_FILE: MSMg01no416_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:01 2005
(245 letters)
>mm_chr2_172995731_172996375
Length = 645
Score = 439 bits (227), Expect = e-128
Identities = 242/251 (96%), Gaps = 7/251 (2%)
Strand = Plus / Plus
Query: 1 accatctttcacctccatccaagccccccc-------accccctgctctcataaccaaat 53
||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 194 accatctttcacctctatccaagccccccccacccccaccccctgctctcataaccaaat 253
Query: 54 ctgtggttggagatagggtctgtatgctcagccaactcagggacagcttcttcagaggca 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctgtggttggagatagggtctgtatgctcagccaactcagggacagcttcttcagaggca 313
Query: 114 gcccaaatcagtgttctggctggaacagggcttgtggaccttattttgtactggaggaaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcccaaatcagtgttctggctggaacagggcttgtggaccttattttgtactggaggaaa 373
Query: 174 ctgaggtccacagtggtgaggttgggccttgtggaagggctggtgacatccagggtttgg 233
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgaggcccacagtggtgaggttgggccttgtggaagggctggtgacatccagggtttgg 433
Query: 234 aggctcttcta 244
|||||||||||
Sbjct: 434 aggctcttcta 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
