Query= MSMg01no416_i08.b1 MSMg01no416_i08.b1 CHROMAT_FILE:
MSMg01no416_i08.b1 PHD_FILE: MSMg01no416_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:10 2005
(568 letters)
>mm_chr2_91201056_91202023
Length = 968
Score = 1067 bits (552), Expect = 0.0
Identities = 561/564 (99%)
Strand = Plus / Plus
Query: 5 gaattcagtgtgctatgcacagcagccaactgggtgcagctagttgcacccagccagccc 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgtgctaggaacagcagccaactgggtgcagctagttgcacccagccagccc 264
Query: 65 tgcaccaaagccagagaacaaagatgaaggaaggaggcaaggatgcggaggagattcttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcaccaaagccagagaacaaagatgaaggaaggaggcaaggatgcggaggagattcttc 324
Query: 125 aagtgacttcccaggaggaatctcagtccagccacacccagttcctttctcctggtaaat 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 aagtgacttcccaggaggaatctcagtccagccacacccagttccttcctcctggtaaat 384
Query: 185 aactcagcaaaactccaaacgggcttagccgagtccctgcaggaatgaacctctcccaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactcagcaaaactccaaacgggcttagccgagtccctgcaggaatgaacctctcccaag 444
Query: 245 gagtaggggatttctccctggctgctgctccaagcgactctcccacccaagcctgcctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagtaggggatttctccctggctgctgctccaagcgactctcccacccaagcctgcctga 504
Query: 305 aggggaagtgtgtgctttctgcaagtcacagcatgtttatcacaggagcaaacaaacagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggggaagtgtgtgctttctgcaagtcacagcatgtttatcacaggagcaaacaaacagc 564
Query: 365 aaacagctcatgaggctcttccccatttcctggcaagagagggaggagctgccttctggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaacagctcatgaggctcttccccatttcctggcaagagagggaggagctgccttctggt 624
Query: 425 tagactggggatttggccacttaaagatgatagtaaatggttctggtagaaacctcactt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagactggggatttggccacttaaagatgatagtaaatggttctggtagaaacctcactt 684
Query: 485 tctgtctatatttgacggctaaattaaaatttgaaccactgtttctacgacaaactgaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctgtctatatttgacggctaaattaaaatttgaaccactgtttctacgacaaactgaac 744
Query: 545 taattggaaatggactataaatca 568
||||||||||||||||||||||||
Sbjct: 745 taattggaaatggactataaatca 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_i08.g1 MSMg01no416_i08.g1 CHROMAT_FILE:
MSMg01no416_i08.g1 PHD_FILE: MSMg01no416_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:10 2005
(492 letters)
>mm_chr2_91377647_91378537
Length = 891
Score = 928 bits (480), Expect = 0.0
Identities = 489/492 (99%), Gaps = 1/492 (0%)
Strand = Plus / Minus
Query: 1 agcttgcatccctatcctgtcccacctggttaaactctggtaaaaatcaatcctctcttc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 691 agcttgcatccctatcctgtcccacctggttaaactctggt-aaaatcaatcctctcttc 633
Query: 61 acctcaagcatgaactaggctgcagaaccactcaaacacaacacatccaaacaccctagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 acctcaagcatgaactaggctgcagaaccactcaaacacaacacatccaaacaccctagg 573
Query: 121 gccctgtcaccacccacaattagagctgatgccccggctttagcacactgcagagggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gccctgtcaccacccacaattagagctgatgccccggctttagcacactgcagagggcat 513
Query: 181 tgttttcactccttcctggacttatactctgaaaggccggttaagtcccatgtactgtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgttttcactccttcctggacttatactctgaaaggccggttaagtcccatgtactgtcc 453
Query: 241 tctaggacttccggaccagaatgggatgcttgccccctctttgtagtctgacacttacgc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 452 tctaggacttccggaccagaatgggatgcttgccccctttttgtagtctgacacttacgc 393
Query: 301 taccctagcaggacgaggtccgccctaatgtccgtgcaggatcagcaggaataccaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 392 taccctagcaggacgaggtccgccctaatgtccgtgcaggatcagcaggaatacccggta 333
Query: 361 gcaggcgggaggcggcggcattggcaagtcagctgctgggaaccgcctcctacgggggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcaggcgggaggcggcggcattggcaagtcagctgctgggaaccgcctcctacgggggcg 273
Query: 421 gggacaggagcaccactgtcaagagtgcccgccccaccctcaatgctcttctgcacgcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gggacaggagcaccactgtcaagagtgcccgccccaccctcaatgctcttctgcacgcac 213
Query: 481 acagaacgctta 492
||||||||||||
Sbjct: 212 acagaacgctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 891
Length adjustment: 10
Effective length of query: 482
Effective length of database: 881
Effective search space: 424642
Effective search space used: 424642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
