XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTCT
GGATCCAGTTATTTTGCATTACACATATATTTTATTTTCATTCTGTTGCT
GTAATAAAACCCTGACTTAAGATGTCTTTGGGAGAAAAATGTTTTATCTC
ACAACTTACTGTCCTTCACTTAGGAAAGTCAGAGCAGGAACTCAAGCAGG
AAACTGTGGCCAAAACAATAGAGGGATGCAGCTTACAGCTTGCTCATTTG
TCTTTCTTACACGACCCAAAACCAAGTTCACAGAGTTGACACCATTCCTA
CTGAGCTGGGCCCTCTTACATCAGTCAAGAAAAATATCTCACAAATAGGC
CTATAGGCTACTCTGATCTGTGCAGTTCTTCAGCTGAGGTCCTCTCTTCT
GAGGTTCCTCTAACTATATCAAGTTGACAAAAACCTAATGTCACAGAAAA
CATACACACACAAAAAAAATCATACAAACTGAGAAGATTGTGCTTCTTTA
ATATATATTCATATATATAAAGATATATTAATTATGATATATATGGATAT
AAAAATAAAACAGGCCATGAATTTGAAAGATAGCAAGGAGAGGATTGTAN
GAGGGTTTGTCGGGAGAAAAGAGGAAGGAAAAAATTATAAATTTTATACN
ATGTAATATCCAAAATGCAATTATAAATATACCCACACAGAGAAATTGGA
TCTACAACTACCTATTTG

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAACAGTATCTGTGTTCTATTTCTTA
AATGTAAAGCAATCCCAAAGAGAATTTAATAGTATATGAGGGTTCTTTCT
TAAAACTAAAAGTGATTTATTGTTTCTGGTATATTTTGCTACTTAATACA
AAATTAACAGGAAGTGCTAAATATGTATCAAAGGAAATATCTGTAGTCAA
AAGTTTTGAAAATATGATAATTTGTCACTATTCAGATATTTATTTATGAG
TATGTACATGTAAAATTAGGAATTATATACCTAATACACCGTGCATATGT
GTTTGAATAATGCTGTGTATATAAACATATATTTACACTAGCTTTAATAT
CAGAAACTGGAAATATATTGATCACATTTTAACAGAGTAACATTTGCTTA
AACTTAGTTTCTATATTTCTAATCTCTTGGCAATGATTTCCTTCACTGAT
AAAATTTTGCTCATGTAGAACTAATAGCATTTATATTGCTTAAATGTGTC
ATTCGATTCTCGTTCATTCAGTGTAGATTTTTCAAATGTTCAAACTTCAA
AACCATATTGGTGACTCTAGACCCCTTCATCCTTATAACCATTATGGATT
TGACATGTTAATATAATGTGATACTTGTATTAACATATAAGATCTTCTGG
TTTCATTCATCACAACTGTATTATAATTTA

Query= MSMg01no416_l18.g1 MSMg01no416_l18.g1 CHROMAT_FILE:
MSMg01no416_l18.g1 PHD_FILE: MSMg01no416_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:25 2005
         (536 letters)



>mm_chr2_40603282_40604217
          Length = 936

 Score = 1036 bits (536), Expect = 0.0
 Identities = 536/536 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacagtatctgtgttctatttcttaaatgtaaagcaatcccaaagagaatttaatagtat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagtatctgtgttctatttcttaaatgtaaagcaatcccaaagagaatttaatagtat 260

                                                                       
Query: 61  atgagggttctttcttaaaactaaaagtgatttattgtttctggtatattttgctactta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagggttctttcttaaaactaaaagtgatttattgtttctggtatattttgctactta 320

                                                                       
Query: 121 atacaaaattaacaggaagtgctaaatatgtatcaaaggaaatatctgtagtcaaaagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacaaaattaacaggaagtgctaaatatgtatcaaaggaaatatctgtagtcaaaagtt 380

                                                                       
Query: 181 ttgaaaatatgataatttgtcactattcagatatttatttatgagtatgtacatgtaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaaaatatgataatttgtcactattcagatatttatttatgagtatgtacatgtaaaa 440

                                                                       
Query: 241 ttaggaattatatacctaatacaccgtgcatatgtgtttgaataatgctgtgtatataaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaggaattatatacctaatacaccgtgcatatgtgtttgaataatgctgtgtatataaa 500

                                                                       
Query: 301 catatatttacactagctttaatatcagaaactggaaatatattgatcacattttaacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catatatttacactagctttaatatcagaaactggaaatatattgatcacattttaacag 560

                                                                       
Query: 361 agtaacatttgcttaaacttagtttctatatttctaatctcttggcaatgatttccttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtaacatttgcttaaacttagtttctatatttctaatctcttggcaatgatttccttca 620

                                                                       
Query: 421 ctgataaaattttgctcatgtagaactaatagcatttatattgcttaaatgtgtcattcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgataaaattttgctcatgtagaactaatagcatttatattgcttaaatgtgtcattcg 680

                                                                   
Query: 481 attctcgttcattcagtgtagatttttcaaatgttcaaacttcaaaaccatattgg 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attctcgttcattcagtgtagatttttcaaatgttcaaacttcaaaaccatattgg 736


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)