NNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTTGATCTGTACCCCATTTTTAATAAGATTATTTGGT
TCTCTGGAGACCAACTTCTTGAGTTCTTTATATATATTGGATATTAGCCC
CCTATCGGATTTAGGATTGGTAAATATCTTTTCCCAATCTGTTGGTTGCT
GTTTTGACAGTGTCCTTTGCCTTATAGAAGCTTTGCAATTTTATGAGGTC
CCATTTGTTGATTCTTAAAATACAAGCCATTGGTGTTGTTTTCAGGAATC
TTTCCCCTGTCCTCATATCTTCAAGGCTCTTCCCCACTTTCTCCTCTATA
AGTTTCAGTGTCTCTGGTTTTACGTGGAGTTCGAAGGACAGTTCCTACGC
ACTCACTCACTTAACAAGCATTTTTCATGCATTGTTTTCAGGCCACAGCA
TTCCAGACATCTGATAACCATCAATTCACTTAATCCTGAAGGCTGGTGCT
GTTGTTTTGAATAATTTAAAAATGAACAAGTGGAAATAGATTGGTATACG
CTATCAAGCTGCAGTCACATGGCTATGGAGAATTTGGACCTGGGAAATTT
GGCTCCCCAGTCTGAGCCCTATTTTCTAGATTGTGTTGTCAGCTGAAGGG
TCATCTCATCTGATCCTCACACCTTCTGAGAGGNCAGCTGATGGCTGAAT
ATCTCGCTTATCCTCCAAACATCTGAGAGACATCTGCAGGTCTGGGCAAG
AA

NTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGAGTACAGAGTTCAGTTTT
GGAGATCCTATGATAGACTTGTTAGGTGGGACTTTAGGAAGAAGAAAGAG
CTTTGGCCTTCAAATCAGGTGGCATGGACACTAAGAGAGTTTCAGAGAAA
GAGTAAGGAAGTTCAAAATAGCTGAAGAAAGATACATAGGCTCTGGCTGG
CATCTGAAAAAATAGAGAAGAGAAAGAGAAGGAAAATGTATGCCTNTTGT
GAGTGGCAGGTAGAAGCAACAGAATCTCTCTCTCTCTTTTTTAATTAGGT
ATTTTCTTCATTTACATTTCAAATGCTATCCCAAAAGTGCCCCAGATTCT
TCCCCCCACTTCCCTACCTCTCCACTCCCACTTCTTGGCCCTGGCGTTCC
CCTGTACTGAGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCA
ATGATGGCCGACTACGCCATCTTCTGATACATATGCAGCTAGAGACATGA
GCTCCGGGGTACTGGTTAGTTCATATTGTTGGAGAATCTATATTTTTAAT
TAGAATTTTTCTTTATTTACATTTCAAAAGTGATCCTCTTTCTTCATTTC
CCTTCTGAAAACACCTATCCCGAAACTCCTTTTTTAAAAAAATTTTTCCT
TATTACCTTTCAAAGGGGACCGGGTTCTTTCTTTCCCCTCCAAATTTCCT
ATCCCATCCCCTCCC

Query= MSMg01no417_b07.b1 MSMg01no417_b07.b1 CHROMAT_FILE:
MSMg01no417_b07.b1 PHD_FILE: MSMg01no417_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:51 2005
         (537 letters)



>mm_chr2_106085177_106086113
          Length = 937

 Score =  758 bits (392), Expect = 0.0
 Identities = 401/404 (99%), Gaps = 1/404 (0%)
 Strand = Plus / Minus

                                                                       
Query: 134 tcccaatctgttggttgctgttttgacagtgtcctttgccttatagaagctttgcaattt 193
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 937 tcccaatctgttggttgctgttttgacagtgtcctttgccttatagaagctttgaaattt 878

                                                                       
Query: 194 tatgaggtcccatttgttgattcttaaaatacaagccattggtgttgttttcaggaatct 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 tatgaggtcccatttgttgattcttaaaatacaagccattggtgttgttttcaggaatct 818

                                                                       
Query: 254 ttcccctgtcctcatatcttcaaggctcttccccactttctcctctataagtttcagtgt 313
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ttcccc-gtcctcatatcttcaaggctcttccccactttctcctctataagtttcagtgt 759

                                                                       
Query: 314 ctctggttttacgtggagttcgaaggacagttcctacgcactcactcacttaacaagcat 373
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 758 ctctggttttacgtggagttcgaaggacagttcctaagcactcactcacttaacaagcat 699

                                                                       
Query: 374 ttttcatgcattgttttcaggccacagcattccagacatctgataaccatcaattcactt 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ttttcatgcattgttttcaggccacagcattccagacatctgataaccatcaattcactt 639

                                                                       
Query: 434 aatcctgaaggctggtgctgttgttttgaataatttaaaaatgaacaagtggaaatagat 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aatcctgaaggctggtgctgttgttttgaataatttaaaaatgaacaagtggaaatagat 579

                                                       
Query: 494 tggtatacgctatcaagctgcagtcacatggctatggagaattt 537
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tggtatacgctatcaagctgcagtcacatggctatggagaattt 535


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no417_b07.g1 MSMg01no417_b07.g1 CHROMAT_FILE:
MSMg01no417_b07.g1 PHD_FILE: MSMg01no417_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:51 2005
         (422 letters)



>mm_chr2_105945193_105946013
          Length = 821

 Score =  777 bits (402), Expect = 0.0
 Identities = 417/422 (98%), Gaps = 1/422 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggagtacagagttcagttttggagatcctatgatagacttgttaggtgggactttagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggagtacagagttcagttttggagatcctatgatagacttgttaggtgggactttagg 260

                                                                       
Query: 61  aagaagaaagagctttggccttcaaatcaggtggcatggacactaagagagtttcagaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaagaaagagctttggccttcaaatcaggtggcatggacactaagagagtttcagaga 320

                                                                       
Query: 121 aagagtaaggaagttcaaaatagctgaagaaagatacataggctctggctggcatctgaa 180
           ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagagtaaggaggttcagaatagctgaagaaagatacataggctctggctggcatctgaa 380

                                                                       
Query: 181 aaaatagagaagagaaagagaaggaaaatgtatgcctnttgtgagtggcaggtagaagca 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aaaatagagaagagaaagagaaggaaaatgtatgcct-ttgtgagtggcaggtagaagca 439

                                                                       
Query: 241 acagaatctctctctctcttttttaattaggtattttcttcatttacatttcaaatgcta 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagaatctctctctcttttttttaattaggtattttcttcatttacatttcaaatgcta 499

                                                                       
Query: 301 tcccaaaagtgccccagattcttccccccacttccctacctctccactcccacttcttgg 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcccaaaagtcccccagattcttccccccacttccctacctctccactcccacttcttgg 559

                                                                       
Query: 361 ccctggcgttcccctgtactgaggcatataaagtttgcaagaccaaggggcctctcttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccctggcgttcccctgtactgaggcatataaagtttgcaagaccaaggggcctctcttcc 619

             
Query: 421 ca 422
           ||
Sbjct: 620 ca 621


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 821
Length adjustment: 9
Effective length of query: 413
Effective length of database: 812
Effective search space:   335356
Effective search space used:   335356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)