ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCGGAATT
CATTGCTTGTCCAAAATTTTGATAGCATTTTAGAGTTTATGCATCCTGTT
AGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA
CATTCTCCACTTGACTCAACCCTTTCCCCCATCTTTAACATTGAAAATTT
TCACTTTTATGCAATCAAATCCATCACTGCTCAGCTACCCTCACATTACT
TCCAATTCTTATGGTCTTACCTCAAGACCCACAACCCATCTCATACATTC
ATAACATTCCATACTACTTTTTTTCCCCTCTACATTCATCTCTCGAACAT
CTCTGCATCTCAACCCCCATCCTAACGACTGCACACAAAAATGATACCTT
CCCTTTACCCCCCCTCCACCCATCCCCCCCTCCTCTAAAACACTCACCCT
GTAATTTACACCCCCTCTCCCCCCCCCTCTAACCTATCCCCTCTCTCAAC
CCATCTCAGTCTCACACCCCCTCCACCCACCCCCCTAACCACACCCCCCC
AACCCTCCTACACTCCTCCCCCCTTCCCCCCACATCAATACCTCCCCTCC
AATCCCCAACCCACTTCCCCCCCCCCCCTCCCCCCACCTTCCCACCCTTC
CCCATCACCCCCACCATACTTCCCCATCACCACCCCTAAACCCCCCCCTC
CTACCATTTCCCTCCCTTTTCCCCCCTCCCCTCCCCCTTCCCCCACCCCC
ACCACCCAATCCCTTATATACCCAACACCCCTCCTTCCCCCCCCTAACG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATGAAACAAGACACTCGTGGCTCTCTTTGC
AACAGATTTCCTTTCATTCTTCCCACTCAGCTGCCCTAGAGGTGCTAGAC
AGCTGCCATTTCTAAACACAGCCCTGATCCGCTGCTTACTTTGATAGTGG
GAAGTGAAAAGTGAGAAATCTCTCTGGGCTCTTATTCACTTAAACTAGTG
GGACCACTAAAGGCAAGAGAAACTCCATCCCCACTCCACTCCTCAGCCCT
ATGGTTGAGGAGTAAAACAGGAAGGAAGTCACACTAATTCACAATCATCC
AAAGCTTGAGGTAGACCAGAAGTCTCACGACTTTCATAGGAGATTGTAAA
GTAGTAACAACAACGATTATTTGCTAAACATGAAATCCAAGAGCCCATTC
AGTTCACACCAAGGGGGTACAAGGTAGATTCACACTGGTCTTTTCCTGTA
TAACCCAGACTGGAAATTCTGAAAACATCTCTGTGAAAGTTCATTCAGGG
AATGCTTTANAAGAACTGTAGTCTCAAAAAGAAAGGAACACATCATCTTT
CATTAAATATTGTCNAAAACTAGCAGAACATTGGCTATGAAGAGATGCCC
ACAGACCTGAAAATTAACGGGTCCGGGGGATGGCTCCTAAAAAGCCAAAA
TTTTTGCCCCGCGAGGGGCTTTGTAATATTGTTTTGTGCCTCACCAAAAA
TCTTGGCCGAATTTGCTCCCTCCAAAAATAACCACAG

Query= MSMg01no417_e23.g1 MSMg01no417_e23.g1 CHROMAT_FILE:
MSMg01no417_e23.g1 PHD_FILE: MSMg01no417_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:09 2005
         (464 letters)



>mm_chr2_117542790_117543653
          Length = 864

 Score =  866 bits (448), Expect = 0.0
 Identities = 460/464 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaacaagacactcgtggctctctttgcaacagatttcctttcattcttcccactcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaaacaagacactcgtggctctctttgcaacagatttcctttcattcttcccactcag 260

                                                                       
Query: 61  ctgccctagaggtgctagacagctgccatttctaaacacagccctgatccgctgcttact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgccctagaggtgctagacagctgccatttctaaacacagccctgatccgctgcttact 320

                                                                       
Query: 121 ttgatagtgggaagtgaaaagtgagaaatctctctgggctcttattcacttaaactagtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgatagtgggaagtgaaaagtgagaaatctctctgggctcttattcacttaaactagtg 380

                                                                       
Query: 181 ggaccactaaaggcaagagaaactccatccccactccactcctcagccctatggttgagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaccactaaaggcaagagaaactccatccccactccactcctcagccctatggttgagg 440

                                                                       
Query: 241 agtaaaacaggaaggaagtcacactaattcacaatcatccaaagcttgaggtagaccaga 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtaaaacagaaaggaagtcacactaattcacaatcatccaaagcttgaggtagaccaga 500

                                                                       
Query: 301 agtctcacgactttcataggagattgtaaagtagtaacaacaacgattatttgctaaaca 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtctcacgattttcataggagattgtaaagtagtaacaacaacgattatttgctaaaca 560

                                                                       
Query: 361 tgaaatccaagagcccattcagttcacaccaagggggtacaaggtagattcacactggtc 420
           ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 561 tgaaatccaagagcccattcagttcacaccaagggagtacaaggaagattcacactggtc 620

                                                       
Query: 421 ttttcctgtataacccagactggaaattctgaaaacatctctgt 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttcctgtataacccagactggaaattctgaaaacatctctgt 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)