Query= MSMg01no418_e10.b1 MSMg01no418_e10.b1 CHROMAT_FILE:
MSMg01no418_e10.b1 PHD_FILE: MSMg01no418_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:26 2005
(569 letters)
>mm_chr2_162369303_162370271
Length = 969
Score = 1056 bits (546), Expect = 0.0
Identities = 561/566 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaaagggttctctaataaataatataaccacattatatttattcacccttgatc 63
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaagggggctgtaataaataatataaccacattatatttattcacccttgatc 263
Query: 64 tatcctttataatattaactaaagaggtaagcagcatggaggagggagaattatttctgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatcctttataatattaactaaagaggtaagcagcatggaggagggagaattatttctgg 323
Query: 124 tatgacaggaaaagagctctgccggggaggagggcagcgcttcacgagagacggcagaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatgacaggaaaagagctctgccggggaggagggcagcgcttcacgagagacggcagaat 383
Query: 184 gtcttttagcaaaggcaagtttgtaatgagtatcaggctgactttttaaaataagagtta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcttttagcaaaggcaagtttgtaatgagtatcaggctgactttttaaaataagagtta 443
Query: 244 ttcaggtgtgaaatgggctcccccagaaatgatgtgtgagtcccttagcttctcgggggc 303
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 444 ttcaggtgtgaaatgggctcccccagaaatgaggtgggagtcccttagcttctcgggggc 503
Query: 304 cataataatgggttagtcatgtatgacagcttgcataatggttactccagtttaggaggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cataataatgggttagtcatgtatgacagcttgcataatggttactccagtttaggaggc 563
Query: 364 tttgggcagccctcttgtgatttatacaatatcaatcggaaaagtatcctatttttgcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttgggcagccctcttgtgatttatacaatatcaatcggaaaagtatcctatttttgcca 623
Query: 424 ggagggaaaagtgttttggagaaccaggctcattgcagtctcctacaaggcaagctcttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggagggaaaagtgttttggagaaccaggctcattgcagtctcctacaaggcaagctcttc 683
Query: 484 atgctaacttgcaatccaccagccccagaatatgctctcatagaagagcctgtgaccccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atgctaacttgcaatccaccagccccagaatatgctctcatagaagagcctgtgaccccc 743
Query: 544 caaagacaaacaggcaaatcacacta 569
||||||||||||||||||||||||||
Sbjct: 744 caaagacaaacaggcaaatcacacta 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_e10.g1 MSMg01no418_e10.g1 CHROMAT_FILE:
MSMg01no418_e10.g1 PHD_FILE: MSMg01no418_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:26 2005
(431 letters)
>mm_chr2_162516058_162516889
Length = 832
Score = 789 bits (408), Expect = 0.0
Identities = 426/432 (98%), Gaps = 1/432 (0%)
Strand = Plus / Minus
Query: 1 attttgaggttccccaaacc-tgtctgtctaacactctcagagcttgtagccagagacag 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attttgaggttccccaaaccttgtctgtctaacactctcagagcttgtagccagagacag 376
Query: 60 gcaacccttggaatgggatgaatgctagcaagaagttagccctgcaaattatgaggtctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcaacccttggaatgggatgaatgctagcaagaagttagccctgcaaattatgaggtctt 316
Query: 120 tgtccatttaatttccactgttatttgagcctgtgtagaaatcaaaaccagaccagtgag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgtccatttaatttccactgttatttgagcctgtgtagaaatcaaaaccagaccagtgag 256
Query: 180 aagaagctgtcaactgaatgtcatgattaaaaacagtagctggcaagacacaaagaaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aagaagctgtcaactgaatgtcatgattaaaaacagtagctggcaagacacaaagaaaca 196
Query: 240 ttaagtgtgatcaagtaatttttctgtttagaacccttcaaagacatctcattaatttcc 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttaagtgtgatcaagtaattttcctgtttagaacccttcaaagacatctcattaatttcc 136
Query: 300 catgacccaaagacccctccccctgggtctactctcacatcggcttcactataaactaac 359
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 135 catgacccaaagacccctccccctgggtctgctctcacgtcggcttcactataaactaac 76
Query: 360 ctcatttgagatccgttcggtagccaccttggtaagtgctgagtatatctgagaatgtga 419
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ctcatttgagatcccttaggtagccaccttggtaagtgctgagtatatctgagaatgtga 16
Query: 420 cttcttcgctca 431
||||||||||||
Sbjct: 15 cttcttcgctca 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
