Query= MSMg01no418_i21.b1 MSMg01no418_i21.b1 CHROMAT_FILE:
MSMg01no418_i21.b1 PHD_FILE: MSMg01no418_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:47 2005
(611 letters)
>mm_chr2_143398584_143399594
Length = 1011
Score = 1139 bits (589), Expect = 0.0
Identities = 603/609 (99%), Gaps = 4/609 (0%)
Strand = Plus / Minus
Query: 5 gaattctggcgcgg--ttgccggggtcaagaaagatgcaggtttctgggcagaacttacc 62
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaattctggcgcggcagtg--ggggtcaagaaagatgcaggtttctgggcagaacttacc 700
Query: 63 ctggggtctctctctagctgccgcttatggtgtaggctgcgtcttcttttggcctttgca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ctggggtctctctctagctgccgcttatggtgtaggctgcgtcttcttttggcctttgca 640
Query: 123 agcccattgtgataaaagtgatacaggccttctgcaaaggggagctgtggaaagccaaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agcccattgtgataaaagtgatacaggccttctgcaaaggggagctgtggaaagccaaac 580
Query: 183 acaggaggatggttagtttctgggttggcaccacgatagaaccacgtgagcaggaactgt 242
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 579 acaggaggatggttagtttctgggttggcaccaggatagaaccacgtgagcaggaactgt 520
Query: 243 atgaggatgcaggtcaagcctcctatcagagccctgatctctgtcctcttgctttcctca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 atgaggatgcaggtcaagcctcctatcagagccctgatctctgtcctcttgctttcctca 460
Query: 303 ctttgcttatctggtatccatttcttcccatttcttccaactccctctattctttcttct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctttgcttatctggtatccatttcttcccatttcttccaactccctctattctttcttct 400
Query: 363 aggttgtagcttttacaaacttatcttcacactcatactcatcaaattctctacatttct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aggttgtagcttttacaaacttatcttcacactcatactcatcaaattctctacatttct 340
Query: 423 ctcagacaagtgtttatacactgcgtggtatccagttgccacagggatgtgctgtgacaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctcagacaagtgtttatacactgcgtggtatccagttgccacagggatgtgctgtgacaa 280
Query: 483 agtattctcttgtatgtagccatgtcttttatcatctaacaggatggccttacaagttgt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agtattctcttgtatgtagccatgtcttttatcatctaacaggatggccttacaagttgt 220
Query: 543 tgctcacttctagggcttccttccttccttccttccttccttccttccttccttccttcc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tgctcacttctagggcttccttccttccttccttccttccttccttccttccttccttcc 160
Query: 603 ttccttcct 611
|||||||||
Sbjct: 159 ttccttcct 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_i21.g1 MSMg01no418_i21.g1 CHROMAT_FILE:
MSMg01no418_i21.g1 PHD_FILE: MSMg01no418_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:47 2005
(525 letters)
>mm_chr2_143372851_143373775
Length = 925
Score = 1002 bits (518), Expect = 0.0
Identities = 523/525 (99%)
Strand = Plus / Plus
Query: 1 tgcttctttaggacacctcgctgccaagagagatggattctgagggggattccccccgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcttctttaggacacctcgctgccaagagagatggattctgagggggattccccccgga 260
Query: 61 aaagtcgaggtgtcctctcctgatgtgtgggcagccagcgtggttttccccagagagcac 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aaagtcgaggtgtcctctcctgatgtgtgggcagccagcgcggttttccccagagagcac 320
Query: 121 ggggatccccattccaagaagttgtccaagttgaactgtttggataagatttcgagcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggatccccattccaagaagttgtccaagttgaactgtttggataagatttcgagcttt 380
Query: 181 gggtgcctctggcaacctctggataagttagggtactcgtcctgcggggaacagaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgcctctggcaacctctggataagttagggtactcgtcctgcggggaacagaggaga 440
Query: 241 ataattcatttggcggggagcatgcctgacctgctcttcctgcgaaatatctgtatccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataattcatttggcggggagcatgcctgacctgctcttcctgcgaaatatctgtatccca 500
Query: 301 gatctggagtgtccttaggggacctggcaccgctaggggagagtgaggatgcaaggagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatctggagtgtccttaggggacctggcaccgctaggggagagtgaggatgcaaggagaa 560
Query: 361 gccagtctgaggggaatggaaggtcaaaggatgcagcttggtacccgtgggctgtcccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccagtctgaggggaatggaaggtcaaaggatgcagcttggtacccgtgggctgtcccct 620
Query: 421 ccctcctgatcccacaagaaaagaggcttgagagagcattgggttccctccctagaangg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 ccctcctgatcccacaagaaaagaggcttgagagagcattgggttccctccctagaaggg 680
Query: 481 caacacaggctggtctcctctgtcagaacttcctatgtctcttgc 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caacacaggctggtctcctctgtcagaacttcctatgtctcttgc 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
